RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 IGKV1OR2-108A0A075B7D4 117 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 A0A1W2PRD5 423 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 A0A1W2PRF3 423 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 A0A1W2PRM7 423 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 CRYGCP07315 174 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 SNRNP70P08621 437 aaKnown RBP7.47□□□□□ -1.21
VPS25-205ENST00000590339 SRP19P09132 144 aaKnown RBP7.47□□□□□ -1.21
VPS25-205ENST00000590339 OR13C7P0DN81 318 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 CDC34P49427 236 aaPredicted RBP7.47□□□□□ -1.21
VPS25-205ENST00000590339 PPT1P50897 306 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 MFAP2P55001 183 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 DEFA5Q01523 94 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 GAMTQ14353 236 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 HNF4GQ14541 408 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 MMDQ15546 238 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 MIC13Q5XKP0 118 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 FAM122CQ6P4D5 195 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 STPG3Q8N7X2 389 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 THAP8Q8NA92 274 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 OR2T10Q8NGZ9 312 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 NANPQ8TBE9 248 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 C17orf50Q8WW18 174 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 SRSF12Q8WXF0 261 aaKnown RBP7.47□□□□□ -1.21
VPS25-205ENST00000590339 RAB24Q969Q5 203 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 SLC35E1Q96K37 410 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 RARRES2Q99969 163 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 NKX6-2Q9C056 277 aaPredicted RBP7.47□□□□□ -1.21
VPS25-205ENST00000590339 EIF5A2Q9GZV4 153 aaKnown RBP7.47□□□□□ -1.21
VPS25-205ENST00000590339 SLC35B3Q9H1N7 401 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 FNDC4Q9H6D8 234 aaPredicted RBP7.47□□□□□ -1.21
VPS25-205ENST00000590339 SLC45A2Q9UMX9 530 aa7.47□□□□□ -1.21
VPS25-205ENST00000590339 CYB5BO43169 146 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 ACTL6BO94805 426 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 SNAPINO95295 136 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 LINC00869P0C866 280 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 AREGP15514 252 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 NPBWR1P48145 328 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 SUB1P53999 127 aaKnown RBP eCLIP7.46□□□□□ -1.22
VPS25-205ENST00000590339 FGF8P55075 233 aaPredicted RBP7.46□□□□□ -1.22
VPS25-205ENST00000590339 B2MP61769 119 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 SSX2Q16385 188 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 HAGHQ16775 308 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 C5orf64Q2M2E5 130 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 GCSAMLQ5JQS6 135 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 OR1P1Q8NH06 330 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 ZNF418Q8TF45 676 aaPredicted RBP7.46□□□□□ -1.22
VPS25-205ENST00000590339 MALSU1Q96EH3 234 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 SLC39A9Q9NUM3 307 aa7.46□□□□□ -1.22
VPS25-205ENST00000590339 F11RQ9Y624 299 aaKnown RBP7.46□□□□□ -1.22
VPS25-205ENST00000590339 CUBNO60494 3623 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 ATRQ13535 2644 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 IGKV1D-37A0A075B6S9 117 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 IGHV3OR16-10A0A075B7F0 116 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 J3QLI3 93 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 DNASE2O00115 360 aaPredicted RBP7.45□□□□□ -1.22
VPS25-205ENST00000590339 CORTO00230 105 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 FCN1O00602 326 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 NPFFO15130 113 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 IFNA1P01562 189 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 STAG3L2P0CL84 134 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 STAG3L3P0CL85 134 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 DEFA4P12838 97 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 GATA3P23771 443 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 PAX6P26367 422 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 SAA4P35542 130 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 TAGLN2P37802 199 aaKnown RBP7.45□□□□□ -1.22
VPS25-205ENST00000590339 LGALS4P56470 323 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 RAB31Q13636 194 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 TEX29Q8N6K0 151 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.45□□□□□ -1.22
VPS25-205ENST00000590339 CLRN3Q8NCR9 226 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 RXFP4Q8TDU9 374 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 SSMEM1Q8WWF3 244 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 MANBALQ9NQG1 85 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 GNG13Q9P2W3 67 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 DMRT1Q9Y5R6 373 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 SVEP1Q4LDE5 3571 aa7.45□□□□□ -1.22
VPS25-205ENST00000590339 CENPVL3A0A0U1RRI6 287 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 PSMB11A5LHX3 300 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 HAX1O00165 279 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 PLXNB1O43157 2135 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 EIF3GO75821 320 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS25-205ENST00000590339 TSPAN9O75954 239 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 REG1AP05451 166 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 OR5G3P0C626 314 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 CTRB1P17538 263 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 OR10J1P30954 320 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 PSMB3P49720 205 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 GNB1P62873 340 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 NDPQ00604 133 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 SCGB2A2Q13296 93 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 PLGLAQ15195 96 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 MLANAQ16655 118 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 FAM90A2PQ658T7 463 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 CTRB2Q6GPI1 263 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 C19orf35Q6ZS72 473 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 PIP4P2Q8N4L2 257 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 MRPL36Q9P0J6 103 aaKnown RBP7.44□□□□□ -1.22
VPS25-205ENST00000590339 VAX2Q9UIW0 290 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms