RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ENY2Q9NPA8 101 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 RSL24D1Q9UHA3 163 aaKnown RBP13.39□□□□□ -0.27
SRSF1-208ENST00000584773 IGHV3-66A0A0C4DH42 116 aa13.38□□□□□ -0.27
SRSF1-208ENST00000584773 B3GALNT1O75752 331 aa13.38□□□□□ -0.27
SRSF1-208ENST00000584773 LILRB2Q8N423 598 aa13.38□□□□□ -0.27
SRSF1-208ENST00000584773 ZFAND3Q9H8U3 227 aa13.38□□□□□ -0.27
SRSF1-208ENST00000584773 RABL2AQ9UBK7 228 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-208ENST00000584773 RABL2BQ9UNT1 228 aa13.38□□□□□ -0.27
SRSF1-208ENST00000584773 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
SRSF1-208ENST00000584773 HYDINQ4G0P3 5121 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 TRAV14DV4A0A0A6YYC5 116 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 A0A1B0GU03 582 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 TMEM50AO95807 157 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 OPRK1P41145 380 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 NPBWR1P48145 328 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 SPCS3P61009 180 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 DHODHQ02127 395 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 TMEM187Q14656 261 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 BSXQ3C1V8 233 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 AARDQ4LEZ3 155 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 APRG1Q8IVJ8 170 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 FAM219AQ8IW50 185 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 GBGT1Q8N5D6 347 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 ST8SIA2Q92186 375 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 OVOL2Q9BRP0 275 aa13.37□□□□□ -0.27
SRSF1-208ENST00000584773 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-208ENST00000584773 RPL35AP18077 110 aaKnown RBP13.36□□□□□ -0.27
SRSF1-208ENST00000584773 SUPT4H1P63272 117 aaKnown RBP13.36□□□□□ -0.27
SRSF1-208ENST00000584773 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
SRSF1-208ENST00000584773 TRIM63Q969Q1 353 aa13.36□□□□□ -0.27
SRSF1-208ENST00000584773 SCP2D1Q9UJQ7 156 aa13.36□□□□□ -0.27
SRSF1-208ENST00000584773 TMEM56-RWDD3S4R434 201 aa13.36□□□□□ -0.27
SRSF1-208ENST00000584773 V9GYH0 126 aa13.36□□□□□ -0.27
SRSF1-208ENST00000584773 OR4C46A6NHA9 309 aa13.35□□□□□ -0.27
SRSF1-208ENST00000584773 AKR1C4P17516 323 aa13.35□□□□□ -0.27
SRSF1-208ENST00000584773 SUB1P53999 127 aaKnown RBP eCLIP13.35□□□□□ -0.273e-12■■■□□ 15.2
SRSF1-208ENST00000584773 KLF9Q13886 244 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-208ENST00000584773 ZNF79Q15937 498 aa13.35□□□□□ -0.27
SRSF1-208ENST00000584773 PYDC2Q56P42 97 aa13.35□□□□□ -0.27
SRSF1-208ENST00000584773 ZNF600Q6ZNG1 722 aa13.35□□□□□ -0.27
SRSF1-208ENST00000584773 TMEM170AQ8WVE7 144 aa13.35□□□□□ -0.27
SRSF1-208ENST00000584773 RBM38Q9H0Z9 239 aaKnown RBP13.35□□□□□ -0.27
SRSF1-208ENST00000584773 DNAH1Q9P2D7 4330 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 CEBPZOSA8MTT3 80 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 CORTO00230 105 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 CLN5O75503 358 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 DEFB135Q30KP9 77 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 TIGITQ495A1 244 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 TCF24Q7RTU0 167 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 WFDC3Q8IUB2 231 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
SRSF1-208ENST00000584773 HEYLQ9NQ87 328 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-208ENST00000584773 PLECQ15149 4684 aaKnown RBP13.33□□□□□ -0.27
SRSF1-208ENST00000584773 LYZL2Q7Z4W2 148 aa13.33□□□□□ -0.28
SRSF1-208ENST00000584773 OR4X1Q8NH49 305 aa13.33□□□□□ -0.28
SRSF1-208ENST00000584773 GALNT14Q96FL9 552 aa13.33□□□□□ -0.28
SRSF1-208ENST00000584773 GINS3Q9BRX5 216 aa13.33□□□□□ -0.28
SRSF1-208ENST00000584773 VSIRQ9H7M9 311 aa13.33□□□□□ -0.28
SRSF1-208ENST00000584773 LCE6AA0A183 80 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 DFFBO76075 338 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 IGKV1-17P01599 117 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 HTR2BP41595 481 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 TMED4Q7Z7H5 227 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 FAM24BQ8N5W8 94 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 SLC24A4Q8NFF2 622 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 MAP6D1Q9H9H5 199 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 KCNIP3Q9Y2W7 256 aa13.32□□□□□ -0.28
SRSF1-208ENST00000584773 SULT1A3P0DMM9 295 aa13.31□□□□□ -0.28
SRSF1-208ENST00000584773 SULT1A4P0DMN0 295 aa13.31□□□□□ -0.28
SRSF1-208ENST00000584773 RND2P52198 227 aa13.31□□□□□ -0.28
SRSF1-208ENST00000584773 EWSR1Q01844 656 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRSF1-208ENST00000584773 C2orf83Q53S99 150 aa13.31□□□□□ -0.28
SRSF1-208ENST00000584773 NMSQ5H8A3 153 aa13.31□□□□□ -0.28
SRSF1-208ENST00000584773 IL22RA2Q969J5 263 aa13.31□□□□□ -0.28
SRSF1-208ENST00000584773 APOC4P55056 127 aa13.3□□□□□ -0.28
SRSF1-208ENST00000584773 PRSS54Q6PEW0 395 aa13.3□□□□□ -0.28
SRSF1-208ENST00000584773 CCDC190Q86UF4 302 aa13.3□□□□□ -0.28
SRSF1-208ENST00000584773 TOMM5Q8N4H5 51 aa13.3□□□□□ -0.28
SRSF1-208ENST00000584773 SCGB3A2Q96PL1 93 aa13.3□□□□□ -0.28
SRSF1-208ENST00000584773 MS4A6AQ9H2W1 248 aa13.3□□□□□ -0.28
SRSF1-208ENST00000584773 ALMS1Q8TCU4 4167 aa13.3□□□□□ -0.28
SRSF1-208ENST00000584773 IGLC1P0CG04 106 aa13.29□□□□□ -0.28
SRSF1-208ENST00000584773 NPY1RP25929 384 aa13.29□□□□□ -0.28
SRSF1-208ENST00000584773 RPL11P62913 178 aaKnown RBP13.29□□□□□ -0.28
SRSF1-208ENST00000584773 RBKSQ9H477 322 aa13.29□□□□□ -0.28
SRSF1-208ENST00000584773 A0A0B4J2A0 478 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 A0A0J9YWU9 116 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 RPS10-NUDT3A0A1W2PQS6 291 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 SPRY2O43597 315 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 S100A5P33763 92 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 CCR6P51684 374 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 TNFRSF9Q07011 255 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 SMCO1Q147U7 214 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 RBMS2Q15434 407 aaKnown RBP13.28□□□□□ -0.28
SRSF1-208ENST00000584773 LEMD1Q68G75 181 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 LGI3Q8N145 548 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 SHPKQ9UHJ6 478 aa13.28□□□□□ -0.28
SRSF1-208ENST00000584773 NPPCP23582 126 aa13.27□□□□□ -0.29
SRSF1-208ENST00000584773 FAUP35544 74 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms