RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 NAPSAO96009 420 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 RASL11AQ6T310 242 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 MRPL52Q86TS9 123 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 ZNF479Q96JC4 524 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 VKORC1Q9BQB6 163 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 TRAV2A0A0B4J234 112 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 OTOFQ9HC10 1997 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 CEACAM1P13688 526 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 PRCDQ00LT1 54 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 LINC01587Q99440 93 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 SMPXQ9UHP9 88 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 PRR32B1ATL7 298 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 EVI2AP22794 236 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 CKS1BP61024 79 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 FOXL1Q12952 345 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 TOMM7Q9P0U1 55 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 TRAV12-3A0A0B4J271 114 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 TIMP3P35625 211 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 OR9G4Q8NGQ1 327 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 NEU4Q8WWR8 484 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 TMEM190Q8WZ59 177 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 ZNF837Q96EG3 531 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 WBP1Q96G27 269 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 CYSLTR1Q9Y271 337 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 TDGF1P13385 188 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 NBR2O15453 112 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 CELA3BP08861 270 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 GZMBP10144 247 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 LINC01560Q8TB33 94 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 FAM57AQ8TBR7 257 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 A0A0G2JMZ2 1700 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 LRRC37A2A6NM11 1700 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 NRXN2Q9P2S2 1712 aa12.12□□□□□ -0.47
CSNK1D-217ENST00000581241 NINQ8N4C6 2090 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 HAX1O00165 279 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 ATP5J2P56134 94 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 ITLN2Q8WWU7 325 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 RNF125Q96EQ8 232 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 NDUFS8O00217 210 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 DLEU1O43261 78 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 GHRHP01286 108 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 C8orf46Q8TAG6 207 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 IFI27L1Q96BM0 104 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 COL4A5P29400 1685 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 F2Z2F3 143 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 GAS1P54826 345 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 SLC25A15Q9Y619 301 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 MTCL1Q9Y4B5 1905 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 TRAV21A0A0B4J279 112 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 BSPH1Q075Z2 132 aa12.11□□□□□ -0.47
CSNK1D-217ENST00000581241 SFTA2Q6UW10 78 aa12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 DPH3Q96FX2 82 aa12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 CD7P09564 240 aa12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 TMEM42Q69YG0 159 aa12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 LAGE3Q14657 143 aa12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 SPAG8Q99932 426 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 TRIP12Q14669 1992 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 ZIC4Q8N9L1 334 aa12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 JMJD8Q96S16 334 aa12.1□□□□□ -0.47
CSNK1D-217ENST00000581241 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 SLC25A20O43772 301 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 PF4P02776 101 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 FAM27E3Q08E93 113 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 ZFAND6Q6FIF0 208 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 IGKV3D-20A0A0C4DH25 116 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 SP9P0CG40 484 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 ATXN8Q156A1 80 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 FDCSPQ8NFU4 85 aa12.09□□□□□ -0.47
CSNK1D-217ENST00000581241 SRSF4Q08170 494 aaKnown RBP12.08□□□□□ -0.47
CSNK1D-217ENST00000581241 CD28P10747 220 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 DUTP33316 252 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 PEMTQ9UBM1 199 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 CACNA1CQ13936 2221 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 CRIM1Q9NZV1 1036 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 IGLV3-32A0A0A0MS00 114 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 LHX2P50458 406 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 NPFFR1Q9GZQ6 430 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 IGHV3OR16-8A0A075B7F1 116 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 PRR19A6NJB7 356 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 TREML4Q6UXN2 200 aa12.08□□□□□ -0.48
CSNK1D-217ENST00000581241 EPOPA6NHQ4 379 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 LINC01549A6NIU2 74 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 ESDP10768 282 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 MALP21145 153 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 LHFPL1Q86WI0 220 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 ERG28Q9UKR5 140 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 UMODP07911 640 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 PLNP26678 52 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 TRAV5A0A0B4J249 113 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 C17orf100A8MU93 164 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 M0R2P5 195 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 GLMPQ8WWB7 406 aa12.07□□□□□ -0.48
CSNK1D-217ENST00000581241 NYNRINQ9P2P1 1898 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-217ENST00000581241 CCL3L1P16619 93 aa12.06□□□□□ -0.48
CSNK1D-217ENST00000581241 KIR3DL3Q8N743 410 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms