RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 CYSRT1A8MQ03 144 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 IGHV1-69P01742 117 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 STAG3L2P0CL84 134 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 STAG3L3P0CL85 134 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 PSMB3P49720 205 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 FXYD3Q14802 87 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 C1RLQ9NZP8 487 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 HMGB3O15347 200 aaKnown RBP22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 EIF3GO75821 320 aaKnown RBP eCLIP22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 DEFA4P12838 97 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 RHOBP62745 196 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 CLRN3Q8NCR9 226 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 ACY3Q96HD9 319 aa22.57■■□□□ 1.2
CTDNEP1-210ENST00000574322 B4DSR2 109 aa22.56■■□□□ 1.2
CTDNEP1-210ENST00000574322 CTRB1P17538 263 aa22.56■■□□□ 1.2
CTDNEP1-210ENST00000574322 CTRB2Q6GPI1 263 aa22.56■■□□□ 1.2
CTDNEP1-210ENST00000574322 TMEM116Q8NCL8 245 aa22.56■■□□□ 1.2
CTDNEP1-210ENST00000574322 OR1L6Q8NGR2 347 aa22.56■■□□□ 1.2
CTDNEP1-210ENST00000574322 Q96MF0 132 aa22.56■■□□□ 1.2
CTDNEP1-210ENST00000574322 TMPRSS5Q9H3S3 457 aa22.56■■□□□ 1.2
CTDNEP1-210ENST00000574322 A0A096LNT2 108 aa22.55■■□□□ 1.2
CTDNEP1-210ENST00000574322 NPBWR1P48145 328 aa22.55■■□□□ 1.2
CTDNEP1-210ENST00000574322 CYP2G1PQ6ZSU1 146 aa22.55■■□□□ 1.2
CTDNEP1-210ENST00000574322 NPIPB3Q92617 1050 aa22.55■■□□□ 1.2
CTDNEP1-210ENST00000574322 DMRT1Q9Y5R6 373 aa22.55■■□□□ 1.2
CTDNEP1-210ENST00000574322 VPS13CQ709C8 3753 aa22.55■■□□□ 1.2
CTDNEP1-210ENST00000574322 IGKV1D-37A0A075B6S9 117 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 CYB561D1Q8N8Q1 229 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 WFDC11Q8NEX6 87 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 ABHD5Q8WTS1 349 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 MISP3Q96FF7 219 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 DNASE2O00115 360 aaPredicted RBP22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 GATA3P23771 443 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 CX3CL1P78423 397 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 FAM120AOSQ5T036 256 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 Q8N9W7 124 aa22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 MRPL36Q9P0J6 103 aaKnown RBP22.54■■□□□ 1.2
CTDNEP1-210ENST00000574322 TCRBV4S1A1TA0A5B7 111 aa22.53■■□□□ 1.2
CTDNEP1-210ENST00000574322 NCBP2LA6PVI3 153 aaKnown RBP22.53■■□□□ 1.2
CTDNEP1-210ENST00000574322 CXorf1O96002 111 aa22.53■■□□□ 1.2
CTDNEP1-210ENST00000574322 APELAP0DMC3 54 aa22.53■■□□□ 1.2
CTDNEP1-210ENST00000574322 SELENOTP62341 195 aa22.53■■□□□ 1.2
CTDNEP1-210ENST00000574322 SLC25A33Q9BSK2 321 aa22.53■■□□□ 1.2
CTDNEP1-210ENST00000574322 SEPSECSQ9HD40 501 aaKnown RBP22.53■■□□□ 1.2
CTDNEP1-210ENST00000574322 PRRC2AP48634 2157 aaKnown RBP22.53■■□□□ 1.2
CTDNEP1-210ENST00000574322 FBP1P09467 338 aa22.52■■□□□ 1.2
CTDNEP1-210ENST00000574322 RND2P52198 227 aa22.52■■□□□ 1.2
CTDNEP1-210ENST00000574322 MEF2BQ02080 365 aaPredicted RBP22.52■■□□□ 1.2
CTDNEP1-210ENST00000574322 WNT10AQ9GZT5 417 aa22.52■■□□□ 1.2
CTDNEP1-210ENST00000574322 TRAV20A0A0B4J274 112 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 C19orf35Q6ZS72 473 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 C22orf15Q8WYQ4 148 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 ARPC1AQ92747 370 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 PSMB11A5LHX3 300 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 NPIPB5A8MRT5 1133 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 HLA-DRB1P01911 266 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 OR5G3P0C626 314 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 CD81P60033 236 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 NANPQ8TBE9 248 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 TRGV9Q99603 122 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 MEGF9Q9H1U4 602 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 FUT9Q9Y231 359 aa22.51■■□□□ 1.19
CTDNEP1-210ENST00000574322 MAP1AP78559 2803 aaPredicted RBP22.5■■□□□ 1.19
CTDNEP1-210ENST00000574322 I3L2K1 104 aa22.5■■□□□ 1.19
CTDNEP1-210ENST00000574322 MT-CO2P00403 227 aa22.5■■□□□ 1.19
CTDNEP1-210ENST00000574322 SPNS3Q6ZMD2 512 aa22.5■■□□□ 1.19
CTDNEP1-210ENST00000574322 ARL14EPLP0DKL9 152 aa22.49■■□□□ 1.19
CTDNEP1-210ENST00000574322 FAM90A2PQ658T7 463 aa22.49■■□□□ 1.19
CTDNEP1-210ENST00000574322 GATAD1Q8WUU5 269 aa22.49■■□□□ 1.19
CTDNEP1-210ENST00000574322 RNF2Q99496 336 aa22.49■■□□□ 1.19
CTDNEP1-210ENST00000574322 C7orf69Q9H7B7 122 aa22.49■■□□□ 1.19
CTDNEP1-210ENST00000574322 TRAV40A0A0B4J280 105 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 TMEM250H0YL14 139 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 GATA2P23769 480 aaPredicted RBP22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 TTC9CQ8N5M4 171 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 FAM74A7A6NL05 159 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 FAM74A3Q4VXF1 159 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 ASPHD1Q5U4P2 390 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 FAM78BQ5VT40 261 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 SPATA31B1PQ5VZV4 182 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 RUSC1-AS1Q66K80 236 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 SUN5Q8TC36 379 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 MYO9AB2RTY4 2548 aa22.48■■□□□ 1.19
CTDNEP1-210ENST00000574322 IGHV7-81A0A0B4J1V7 117 aa22.47■■□□□ 1.19
CTDNEP1-210ENST00000574322 RNF223E7ERA6 249 aa22.47■■□□□ 1.19
CTDNEP1-210ENST00000574322 IGHV3-48P01763 117 aa22.47■■□□□ 1.19
CTDNEP1-210ENST00000574322 NDPQ00604 133 aa22.47■■□□□ 1.19
CTDNEP1-210ENST00000574322 TXNDC17Q9BRA2 123 aa22.47■■□□□ 1.19
CTDNEP1-210ENST00000574322 MRPL32Q9BYC8 188 aaKnown RBP22.47■■□□□ 1.19
CTDNEP1-210ENST00000574322 HIF1ANQ9NWT6 349 aa22.47■■□□□ 1.19
CTDNEP1-210ENST00000574322 AKAP9Q99996 3911 aa22.47■■□□□ 1.19
CTDNEP1-210ENST00000574322 PAGE4O60829 102 aa22.46■■□□□ 1.19
CTDNEP1-210ENST00000574322 LINC01356Q8N9X3 169 aa22.46■■□□□ 1.19
CTDNEP1-210ENST00000574322 OR4X1Q8NH49 305 aa22.46■■□□□ 1.19
CTDNEP1-210ENST00000574322 TMEM37Q8WXS4 190 aa22.46■■□□□ 1.19
CTDNEP1-210ENST00000574322 FAM103A1Q9BTL3 118 aaKnown RBP22.46■■□□□ 1.19
CTDNEP1-210ENST00000574322 TNFRSF19Q9NS68 423 aa22.46■■□□□ 1.19
CTDNEP1-210ENST00000574322 H3BQ15 152 aa22.45■■□□□ 1.19
CTDNEP1-210ENST00000574322 GCHFRP30047 84 aa22.45■■□□□ 1.19
CTDNEP1-210ENST00000574322 ZNF90Q03938 601 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms