RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 NOXA1Q86UR1 476 aa11.27□□□□□ -0.61
NPLOC4-207ENST00000572346 ZNF114Q8NC26 417 aa11.27□□□□□ -0.61
NPLOC4-207ENST00000572346 MISP3Q96FF7 219 aa11.27□□□□□ -0.61
NPLOC4-207ENST00000572346 CIB3Q96Q77 187 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-207ENST00000572346 C7orf66A4D0T2 115 aa11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 EXOSC2Q13868 293 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 SLC24A4Q8NFF2 622 aa11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 OR4D5Q8NGN0 318 aa11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 EEF1AKMT3Q96AZ1 226 aa11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 PINX1Q96BK5 328 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 CXorf58Q96LI9 332 aa11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 PAIP2BQ9ULR5 123 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 EPPK1P58107 5090 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-207ENST00000572346 CSMD3Q7Z407 3707 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 ANKRD34BA5PLL1 514 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 CORTO00230 105 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 SIX6O95475 246 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 NPY1RP25929 384 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 MFAP2P55001 183 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 POLR2GP62487 172 aaKnown RBP eCLIP11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 RPP30P78346 268 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 ID3Q02535 119 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 KLF5Q13887 457 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 MED28Q9H204 178 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 MGAT4CQ9UBM8 478 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 S4R3C0 116 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 U3KQ87 197 aa11.25□□□□□ -0.61
NPLOC4-207ENST00000572346 STARD9Q9P2P6 4700 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 IGHV3-21A0A0B4J1V1 117 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 SSSCA1O60232 199 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 IGHV3-23P01764 117 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 KLK9Q2XQG4 91 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 FAM209BQ5JX69 171 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 IL34Q6ZMJ4 242 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 OR9G4Q8NGQ1 327 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 SPATA25Q9BR10 227 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 KLK9Q9UKQ9 250 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 LSM5Q9Y4Y9 91 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
NPLOC4-207ENST00000572346 LYSTQ99698 3801 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 L7N2F9 121 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 IFNA4P05014 189 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 OPRK1P41145 380 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 ATP5IP56385 69 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 SYNJ2BPP57105 145 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 S100A10P60903 97 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 RAB11AP62491 216 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 VAMP2P63027 116 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 CYCSP99999 105 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 HAGHQ16775 308 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 SPANXN5Q5MJ07 72 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 ZNF343Q6P1L6 599 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 ADAMTSL5Q6ZMM2 481 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 VN1R17PQ8TDU5 208 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
NPLOC4-207ENST00000572346 DNAH1Q9P2D7 4330 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 RPS10-NUDT3A0A1W2PQS6 291 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 MFSD2BA6NFX1 497 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 MT-CO2P00403 227 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 PVALBP20472 110 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 BSXQ3C1V8 233 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 Q56UQ5 140 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 SCARB1Q8WTV0 552 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 RAB40CQ96S21 281 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 C21orf62Q9NYP8 219 aa11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 RCL1Q9Y2P8 373 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-207ENST00000572346 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 H3BP45 60 aa11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 K7EIM0 57 aa11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 TRBV12-3P01733 135 aa11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 CSN3P07498 182 aa11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 MFAP4P55083 255 aa11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 RNASEH2CQ8TDP1 164 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 SMIM8Q96KF7 97 aa11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 NMES1Q9C002 83 aa11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 STRAPQ9Y3F4 350 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 BIRC6Q9NR09 4857 aa11.21□□□□□ -0.61
NPLOC4-207ENST00000572346 I3L2K1 104 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 K7EPK0 472 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 RLN2P04090 185 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 CLEC3BP05452 202 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 GPR183P32249 361 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 ARL3P36405 182 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 BCAP31P51572 246 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 RAB32Q13637 225 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 FCN2Q15485 313 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 RPEL1Q2QD12 228 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 ETFRF1Q6IPR1 90 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 LCN12Q6JVE5 192 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 GTSCR1Q86UQ5 136 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 ZNF502Q8TBZ5 544 aa11.2□□□□□ -0.62
NPLOC4-207ENST00000572346 TUBA4BQ9H853 241 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms