RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 RBMY1EA6NEQ0 496 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR5B21A6NL26 309 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 TRIM64CA6NLI5 447 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 TMEM212A6NML5 194 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ZNF729A6NN14 1252 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 VGLL3A8MV65 326 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SEC14L6B5MCN3 397 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 MCRIP1C9JLW8 97 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PPP5D1E7EU14 171 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 H7C2Y5 167 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 I3L521 148 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 AIPO00170 330 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 HSD17B6O14756 317 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 DEFB4AO15263 64 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 MAGEB3O15480 346 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ZNF207O43670 478 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 SULT1B1O43704 296 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RAMP3O60896 148 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GATBO75879 557 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 ATP5HO75947 161 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 FSTL3O95633 263 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 MOSP00540 346 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 APOC1P02654 83 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GAPDHP04406 335 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 PRM2P04554 102 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ALDOBP05062 364 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 CDK1P06493 297 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR8U9P0C7N5 309 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RBMY1DP0C7P1 496 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 IGKV1-13P0DP09 117 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 CD37P11049 281 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GTF2F2P13984 249 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SPNP16150 400 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RAB3AP20336 220 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GZMHP20718 246 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PRKACBP22694 351 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 NFYAP23511 347 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 DCKP27707 260 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 CALRP27797 417 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 BLVRBP30043 206 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 BRS3P32247 399 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SOX6P35712 828 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 HSPA13P48723 471 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RAB9AP51151 201 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 AQP4P55087 323 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RBM11P57052 281 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 SYNJ2BPP57105 145 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 BPIFB3P59826 476 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 DEFB1P60022 68 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RPL23AP62750 156 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 RPL30P62888 115 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 FABP5Q01469 135 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 EWSR1Q01844 656 aaKnown RBP eCLIP0.76□□□□□ -2.29
SMG1-212ENST00000566328 BDH1Q02338 343 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 MXD1Q05195 221 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 MEF2CQ06413 473 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 GABPB1Q06547 395 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 RAB40BQ12829 278 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GPR176Q14439 515 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 FXYD3Q14802 87 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 NEDD8Q15843 81 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SNCBQ16143 134 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SSX1Q16384 188 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 HLA-DRB5Q30154 266 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SMIM21Q3B7S5 101 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ZNF829Q3KNS6 432 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 CDNFQ49AH0 187 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SPINK9Q5DT21 86 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RBM48Q5RL73 367 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 VAX1Q5SQQ9 334 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 C10orf55Q5SWW7 151 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OGFRL1Q5TC84 451 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 ELP2Q6IA86 826 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 C22orf42Q6IC83 251 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RPL22L1Q6P5R6 122 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 ASCL4Q6XD76 172 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 TMPRSS11AQ6ZMR5 421 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 Q6ZSR3 168 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SLC25A48Q6ZT89 311 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 UTS2BQ765I0 119 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SSX9Q7RTT3 188 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR2W3Q7Z3T1 314 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SLC35E3Q7Z769 313 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 NDUFA11Q86Y39 141 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GID4Q8IVV7 300 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 C10orf67Q8IYJ2 551 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 Q8N2B8 174 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OSR2Q8N2R0 312 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 STPG2Q8N412 459 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 STX19Q8N4C7 294 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 DHRSXQ8N5I4 330 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 TMEM86BQ8N661 226 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 Q8N6K4 173 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 C5orf56Q8N8D9 126 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 CHST4Q8NCG5 386 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ZNF439Q8NDP4 499 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ZNF555Q8NEP9 628 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PXT1Q8NFP0 134 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR11H1Q8NG94 326 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR10W1Q8NGF6 305 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms