RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 OPRK1P41145 380 aa17.16■□□□□ 0.34
BRF1-216ENST00000550208 SPSB3Q6PJ21 355 aa17.16■□□□□ 0.34
BRF1-216ENST00000550208 ZBTB8BQ8NAP8 495 aaPredicted RBP17.16■□□□□ 0.34
BRF1-216ENST00000550208 GSKIPQ9P0R6 139 aa17.16■□□□□ 0.34
BRF1-216ENST00000550208 WRBO00258 174 aa17.15■□□□□ 0.34
BRF1-216ENST00000550208 NKX2-1P43699 371 aaPredicted RBP17.15■□□□□ 0.34
BRF1-216ENST00000550208 POLR2GP62487 172 aaKnown RBP eCLIP17.15■□□□□ 0.34
BRF1-216ENST00000550208 UNQ9165/PRO28630Q6UXU0 137 aa17.15■□□□□ 0.34
BRF1-216ENST00000550208 REC114Q7Z4M0 266 aa17.15■□□□□ 0.34
BRF1-216ENST00000550208 NOXA1Q86UR1 476 aa17.15■□□□□ 0.34
BRF1-216ENST00000550208 HAPLN4Q86UW8 402 aa17.15■□□□□ 0.34
BRF1-216ENST00000550208 RNASEH2CQ8TDP1 164 aaKnown RBP17.15■□□□□ 0.34
BRF1-216ENST00000550208 ZNF436Q9C0F3 470 aaPredicted RBP17.15■□□□□ 0.34
BRF1-216ENST00000550208 GPN1Q9HCN4 374 aaPredicted RBP17.15■□□□□ 0.34
BRF1-216ENST00000550208 GAR1Q9NY12 217 aaKnown RBP17.15■□□□□ 0.34
BRF1-216ENST00000550208 PEMTQ9UBM1 199 aa17.15■□□□□ 0.34
BRF1-216ENST00000550208 FAM25EA8MYX2 175 aa17.14■□□□□ 0.33
BRF1-216ENST00000550208 TMEM50AO95807 157 aa17.14■□□□□ 0.33
BRF1-216ENST00000550208 EDN2P20800 178 aa17.14■□□□□ 0.33
BRF1-216ENST00000550208 NPBWR1P48145 328 aa17.14■□□□□ 0.33
BRF1-216ENST00000550208 ADAMTSL5Q6ZMM2 481 aa17.14■□□□□ 0.33
BRF1-216ENST00000550208 ZNF414Q96IQ9 312 aa17.14■□□□□ 0.33
BRF1-216ENST00000550208 AURKAIP1Q9NWT8 199 aaPredicted RBP17.14■□□□□ 0.33
BRF1-216ENST00000550208 MEGF8Q7Z7M0 2845 aa17.13■□□□□ 0.33
BRF1-216ENST00000550208 NUPL2O15504 423 aaKnown RBP17.13■□□□□ 0.33
BRF1-216ENST00000550208 GNG7O60262 68 aa17.13■□□□□ 0.33
BRF1-216ENST00000550208 ATP5IP56385 69 aaPredicted RBP17.13■□□□□ 0.33
BRF1-216ENST00000550208 CIB3Q96Q77 187 aaPredicted RBP17.13■□□□□ 0.33
BRF1-216ENST00000550208 RPS10-NUDT3A0A1W2PQS6 291 aa17.12■□□□□ 0.33
BRF1-216ENST00000550208 C5orf51A6NDU8 294 aa17.12■□□□□ 0.33
BRF1-216ENST00000550208 C2orf70A6NJV1 201 aa17.12■□□□□ 0.33
BRF1-216ENST00000550208 C15orf62A8K5M9 175 aa17.12■□□□□ 0.33
BRF1-216ENST00000550208 PRAF2O60831 178 aa17.12■□□□□ 0.33
BRF1-216ENST00000550208 IFNA4P05014 189 aa17.12■□□□□ 0.33
BRF1-216ENST00000550208 TM4SF20Q53R12 229 aa17.12■□□□□ 0.33
BRF1-216ENST00000550208 OR4X1Q8NH49 305 aa17.12■□□□□ 0.33
BRF1-216ENST00000550208 SNRPGP15A8MWD9 76 aa17.11■□□□□ 0.33
BRF1-216ENST00000550208 CLN5O75503 358 aa17.11■□□□□ 0.33
BRF1-216ENST00000550208 SCGB1D2O95969 90 aa17.11■□□□□ 0.33
BRF1-216ENST00000550208 IGLV1-51P01701 117 aa17.11■□□□□ 0.33
BRF1-216ENST00000550208 PRSS54Q6PEW0 395 aa17.11■□□□□ 0.33
BRF1-216ENST00000550208 SIGLEC8Q9NYZ4 499 aa17.11■□□□□ 0.33
BRF1-216ENST00000550208 ZMAT5Q9UDW3 170 aaKnown RBP17.11■□□□□ 0.33
BRF1-216ENST00000550208 PAIP2BQ9ULR5 123 aaKnown RBP17.11■□□□□ 0.33
BRF1-216ENST00000550208 DNAH3Q8TD57 4116 aa17.11■□□□□ 0.33
BRF1-216ENST00000550208 WI2-2373I1.2A0A1W2PRP0 233 aa17.1■□□□□ 0.33
BRF1-216ENST00000550208 TMEM213A2RRL7 107 aa17.1■□□□□ 0.33
BRF1-216ENST00000550208 NDUFA4O00483 81 aa17.1■□□□□ 0.33
BRF1-216ENST00000550208 FOLR2P14207 255 aa17.1■□□□□ 0.33
BRF1-216ENST00000550208 CD69Q07108 199 aa17.1■□□□□ 0.33
BRF1-216ENST00000550208 SPANXN5Q5MJ07 72 aa17.1■□□□□ 0.33
BRF1-216ENST00000550208 C2orf50Q96LR7 162 aa17.1■□□□□ 0.33
BRF1-216ENST00000550208 PALMDQ9NP74 551 aa17.1■□□□□ 0.33
BRF1-216ENST00000550208 IGHV3OR16-8A0A075B7F1 116 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 SSSCA1O60232 199 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 MBPP02686 304 aaPredicted RBP17.09■□□□□ 0.33
BRF1-216ENST00000550208 SLC25A4P12235 298 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 CBLN1P23435 193 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 RND2P52198 227 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 PAX9P55771 341 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 RAB11AP62491 216 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 RPP30P78346 268 aaKnown RBP17.09■□□□□ 0.33
BRF1-216ENST00000550208 RELQ04864 619 aaPredicted RBP17.09■□□□□ 0.33
BRF1-216ENST00000550208 ETFRF1Q6IPR1 90 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 GSG1LQ6UXU4 331 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 CACNG8Q8WXS5 425 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 TMEM190Q8WZ59 177 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 SMIM8Q96KF7 97 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 PSENENQ9NZ42 101 aa17.09■□□□□ 0.33
BRF1-216ENST00000550208 A8MWP6 167 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 H3BP45 60 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 PTTG1O95997 202 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 SLC16A13Q7RTY0 426 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 NPIPB3Q92617 1050 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 PRR25Q96S07 402 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 C20orf24Q9BUV8 137 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 UFC1Q9Y3C8 167 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 SELENOKQ9Y6D0 94 aa17.08■□□□□ 0.32
BRF1-216ENST00000550208 ZNF207O43670 478 aaKnown RBP17.07■□□□□ 0.32
BRF1-216ENST00000550208 YIF1AO95070 293 aa17.07■□□□□ 0.32
BRF1-216ENST00000550208 SIX6O95475 246 aa17.07■□□□□ 0.32
BRF1-216ENST00000550208 LY86O95711 162 aa17.07■□□□□ 0.32
BRF1-216ENST00000550208 GPX4P36969 197 aaPredicted RBP17.07■□□□□ 0.32
BRF1-216ENST00000550208 ELLP55199 621 aaPredicted RBP17.07■□□□□ 0.32
BRF1-216ENST00000550208 TIGITQ495A1 244 aa17.07■□□□□ 0.32
BRF1-216ENST00000550208 TMEM116Q8NCL8 245 aa17.07■□□□□ 0.32
BRF1-216ENST00000550208 ACY3Q96HD9 319 aa17.07■□□□□ 0.32
BRF1-216ENST00000550208 ZNF256Q9Y2P7 627 aaPredicted RBP17.07■□□□□ 0.32
BRF1-216ENST00000550208 STRAPQ9Y3F4 350 aaKnown RBP17.07■□□□□ 0.32
BRF1-216ENST00000550208 K7EIL1 84 aa17.06■□□□□ 0.32
BRF1-216ENST00000550208 C8orf88P0DMB2 117 aa17.06■□□□□ 0.32
BRF1-216ENST00000550208 IL15RAQ13261 267 aa17.06■□□□□ 0.32
BRF1-216ENST00000550208 DEFB114Q30KQ6 69 aa17.06■□□□□ 0.32
BRF1-216ENST00000550208 TOMM20LQ6UXN7 152 aa17.06■□□□□ 0.32
BRF1-216ENST00000550208 RAB40CQ96S21 281 aa17.06■□□□□ 0.32
BRF1-216ENST00000550208 RCL1Q9Y2P8 373 aaKnown RBP17.06■□□□□ 0.32
BRF1-216ENST00000550208 SORL1Q92673 2214 aa17.05■□□□□ 0.32
BRF1-216ENST00000550208 TRAV30A0A087WSZ9 112 aa17.05■□□□□ 0.32
BRF1-216ENST00000550208 IZUMO1RA6ND01 250 aa17.05■□□□□ 0.32
BRF1-216ENST00000550208 K7EMT4 169 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms