RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SPATA3Q8NHX4 192 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 THAP6Q8TBB0 222 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 C4orf3Q8WVX3 66 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 ZNF414Q96IQ9 312 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 SLC25A31Q9H0C2 315 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 GNB4Q9HAV0 340 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 NPVFQ9HCQ7 196 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 ZNF355PQ9NSJ1 428 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 GAR1Q9NY12 217 aaKnown RBP4.53□□□□□ -1.68
ABCF1-207ENST00000542772 C21orf62Q9NYP8 219 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 MRPL36Q9P0J6 103 aaKnown RBP4.53□□□□□ -1.68
ABCF1-207ENST00000542772 PEF1Q9UBV8 284 aaKnown RBP4.53□□□□□ -1.68
ABCF1-207ENST00000542772 COL6A5A8TX70 2615 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 RPS10-NUDT3A0A1W2PQS6 291 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 IGSF23A1L1A6 192 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 MFSD2BA6NFX1 497 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 H3BP45 60 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 CLN5O75503 358 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 IFNA4P05014 189 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 LGALS1P09382 135 aaKnown RBP4.52□□□□□ -1.69
ABCF1-207ENST00000542772 OR8U8P0C7N1 319 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 METTL15P1P0C7V9 234 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 ADMP35318 185 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 MYCNOSP40205 109 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 NPBWR1P48145 328 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 S100A10P60903 97 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 DLK1P80370 383 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 BAXQ07812 192 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 FHL3Q13643 280 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 LRRC37A5PQ49AS3 106 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 C18orf65Q6ZTR6 163 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 ACOT7LQ6ZUV0 252 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 TMEM144Q7Z5S9 345 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 GPHB5Q86YW7 130 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 C3orf56Q8N813 242 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 THAP8Q8NA92 274 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 OR11H4Q8NGC9 324 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 EEF1AKMT3Q96AZ1 226 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 PINX1Q96BK5 328 aaKnown RBP4.52□□□□□ -1.69
ABCF1-207ENST00000542772 MISP3Q96FF7 219 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 BSCL2Q96G97 398 aaPredicted RBP4.52□□□□□ -1.69
ABCF1-207ENST00000542772 CCDC140Q96MF4 163 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 AQP10Q96PS8 301 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 MBD2Q9UBB5 411 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 TNFSF18Q9UNG2 199 aa4.52□□□□□ -1.69
ABCF1-207ENST00000542772 IGKV1D-37A0A075B6S9 117 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 IGKV1OR2-108A0A075B7D4 117 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 TGOLN2O43493 480 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 CST7O76096 145 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 IGHV3-11P01762 117 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 C1QBP02746 253 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 IGLC1P0CG04 106 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 OPRK1P41145 380 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 CAV2P51636 162 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 YPEL3P61236 119 aaPredicted RBP4.51□□□□□ -1.69
ABCF1-207ENST00000542772 HBG1P69891 147 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 HBG2P69892 147 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 EWSR1Q01844 656 aaKnown RBP eCLIP4.51□□□□□ -1.69
ABCF1-207ENST00000542772 KLF5Q13887 457 aaPredicted RBP4.51□□□□□ -1.69
ABCF1-207ENST00000542772 SPSB3Q6PJ21 355 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 TREML4Q6UXN2 200 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 CLEC19AQ6UXS0 136 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 AKAP14Q86UN6 197 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 C11orf44Q8N8P7 122 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 WFDC9Q8NEX5 89 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 OR11H1Q8NG94 326 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 OR1N2Q8NGR9 330 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 DCUN1D4Q92564 292 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 NPIPB3Q92617 1050 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 HYLS1Q96M11 299 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 CHRDL1Q9BU40 450 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 PARD6GQ9BYG4 376 aaPredicted RBP4.51□□□□□ -1.69
ABCF1-207ENST00000542772 LSM4Q9Y4Z0 139 aaKnown RBP4.51□□□□□ -1.69
ABCF1-207ENST00000542772 HSPB11Q9Y547 144 aa4.51□□□□□ -1.69
ABCF1-207ENST00000542772 IGHV4OR15-8A0A075B7B6 117 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 A0A087WW49 117 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 IGHV3-21A0A0B4J1V1 117 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 LINC01619G3V211 115 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 SMLR1H3BR10 107 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 K7EMT4 169 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 CCL24O00175 119 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 LGALS9O00182 355 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 BMPR1BO00238 502 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 GNG7O60262 68 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 GGCTO75223 188 aaKnown RBP4.5□□□□□ -1.69
ABCF1-207ENST00000542772 IGKV1-17P01599 117 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 TRBV12-3P01733 135 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 IGHV3-48P01763 117 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 DEFA5Q01523 94 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 CD300CQ08708 224 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 SLC38A11Q08AI6 406 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 ZNF616Q08AN1 781 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 OR2F1Q13607 317 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 ZNF345Q14585 488 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 LGALSLQ3ZCW2 172 aaPredicted RBP4.5□□□□□ -1.69
ABCF1-207ENST00000542772 HIST2H2BDQ6DRA6 164 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 OR8G2PQ6IF36 304 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 ACSM6Q6P461 480 aa4.5□□□□□ -1.69
ABCF1-207ENST00000542772 TEPPQ6URK8 271 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms