RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 LINC00696Q6ZRV3 163 aa14.35□□□□□ -0.11
RAB40C-205ENST00000539661 SAA2P0DJI9 122 aaPredicted RBP14.35□□□□□ -0.11
RAB40C-205ENST00000539661 GATA2P23769 480 aaPredicted RBP14.35□□□□□ -0.11
RAB40C-205ENST00000539661 GCSAMQ8N6F7 178 aa14.35□□□□□ -0.11
RAB40C-205ENST00000539661 NHLRC2Q8NBF2 726 aa14.35□□□□□ -0.11
RAB40C-205ENST00000539661 SMIM12Q96EX1 92 aa14.35□□□□□ -0.11
RAB40C-205ENST00000539661 ZNF714Q96N38 554 aa14.35□□□□□ -0.11
RAB40C-205ENST00000539661 GVINP1Q7Z2Y8 2422 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 PCNX2A6NKB5 2137 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 PSMB11A5LHX3 300 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 OR4C46A6NHA9 309 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 UPK2O00526 184 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 CGB3P0DN86 165 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 CGB7P0DN87 165 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 CHCHD1Q96BP2 118 aaKnown RBP14.34□□□□□ -0.11
RAB40C-205ENST00000539661 FAM122AQ96E09 287 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 SPRY4Q9C004 299 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 CLCF1Q9UBD9 225 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 PEX7O00628 323 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 CT45A1Q5HYN5 189 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 MDS2Q8NDY4 140 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 CT45A3Q8NHU0 189 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 CACNG8Q8WXS5 425 aa14.34□□□□□ -0.11
RAB40C-205ENST00000539661 TRGV5A0A0B4J1U4 118 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 IGHV3-13P01766 116 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 IGHV3-7P01780 117 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 CFHR2P36980 270 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 CD69Q07108 199 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 FAM120AOSQ5T036 256 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 PEAR1Q5VY43 1037 aaPredicted RBP14.33□□□□□ -0.11
RAB40C-205ENST00000539661 MBNL2Q5VZF2 373 aaKnown RBP14.33□□□□□ -0.11
RAB40C-205ENST00000539661 Q6ZT83 130 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 SPATA12Q7Z6I5 190 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 MOB3BQ86TA1 216 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 SPRR3Q9UBC9 169 aa14.33□□□□□ -0.11
RAB40C-205ENST00000539661 HIGD1CA8MV81 97 aa14.33□□□□□ -0.12
RAB40C-205ENST00000539661 TAX1BP3O14907 124 aa14.33□□□□□ -0.12
RAB40C-205ENST00000539661 C12orf54Q6X4T0 127 aa14.33□□□□□ -0.12
RAB40C-205ENST00000539661 ZNF329Q86UD4 541 aa14.33□□□□□ -0.12
RAB40C-205ENST00000539661 SOX21Q9Y651 276 aaPredicted RBP14.33□□□□□ -0.12
RAB40C-205ENST00000539661 COL27A1Q8IZC6 1860 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-205ENST00000539661 MYOD1P15172 320 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 HOXC12P31275 282 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 MPV17L2Q567V2 206 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 DEFB125Q8N687 156 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 OR9G1Q8NH87 305 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 URB1-AS1Q96HZ7 61 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 LINC00479Q96M42 142 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 DEFB127Q9H1M4 99 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 C7orf69Q9H7B7 122 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 ZFHX2Q9C0A1 2572 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-205ENST00000539661 A0A1W2PNU3 283 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-205ENST00000539661 RNASE2P10153 161 aaKnown RBP14.32□□□□□ -0.12
RAB40C-205ENST00000539661 SLC25A34Q6PIV7 304 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 SMIM15Q7Z3B0 74 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 KIR3DL3Q8N743 410 aa14.32□□□□□ -0.12
RAB40C-205ENST00000539661 SYS1-DBNDD2H3BUS1 97 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 TOX4O94842 621 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 GPR6P46095 362 aaPredicted RBP14.31□□□□□ -0.12
RAB40C-205ENST00000539661 FABP6P51161 128 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 C17orf58Q2M2W7 97 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 BVES-AS1Q5T3Y7 98 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 OR1L4Q8NGR5 311 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 SSBP4Q9BWG4 385 aaPredicted RBP14.31□□□□□ -0.12
RAB40C-205ENST00000539661 TEX50A0A1B0GTY4 177 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 HLA-DRB1P01911 266 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 ACP1P24666 158 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 HBBP68871 147 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 RNF151Q2KHN1 245 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 C1orf162Q8NEQ5 155 aaPredicted RBP14.31□□□□□ -0.12
RAB40C-205ENST00000539661 PAXXQ9BUH6 204 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 CLEC5AQ9NY25 188 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 RELNP78509 3460 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 AKAP13Q12802 2813 aa14.31□□□□□ -0.12
RAB40C-205ENST00000539661 CA7P43166 264 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 CAMPP49913 170 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 OR2T6Q8NHC8 308 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 TMEM191AQ9H0A3 160 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 SVILO95425 2214 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 TRAV5A0A0B4J249 113 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 OR5AL1P0C617 328 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 CD46P15529 392 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 CST9LQ9H4G1 147 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 WASHC3Q9Y3C0 194 aa14.3□□□□□ -0.12
RAB40C-205ENST00000539661 KBTBD11-OT1A0A1B0GTJ5 212 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 HSBP1L1C9JCN9 74 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 CT83Q5H943 113 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 MORN5Q5VZ52 161 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 FZR1Q9UM11 496 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 DLL1O00548 723 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 AGFG2O95081 481 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 NUDT3O95989 172 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 OCIAD2Q56VL3 154 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 LEAP2Q969E1 77 aa14.29□□□□□ -0.12
RAB40C-205ENST00000539661 IGHV1-24A0A0C4DH33 117 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 COX7A2P2O60397 106 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 LEPROTL1O95214 131 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 CECR9P0C854 216 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 BPIFB3P59826 476 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 SSX8Q7RTT4 187 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms