RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 C20orf24Q9BUV8 137 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 DAZ1Q9NQZ3 744 aaKnown RBP4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 SIGLEC8Q9NYZ4 499 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 TECRQ9NZ01 308 aaKnown RBP4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 TBC1D24Q9ULP9 559 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 DMRT1Q9Y5R6 373 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 DNHD1Q96M86 4753 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 MGAM2Q2M2H8 2515 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 C5orf51A6NDU8 294 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 C2orf70A6NJV1 201 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 SYNGR2O43760 224 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 PRAF2O60831 178 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 PITX3O75364 302 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 ADAP1O75689 374 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 IGLV1-51P01701 117 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 IGHV3-48P01763 117 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 CSN3P07498 182 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 IAPPP10997 89 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 FOLR2P14207 255 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 GP9P14770 177 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 SPNP16150 400 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 NKX2-1P43699 371 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 KRTAP10-11P60412 298 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 GUCA2BQ16661 112 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 BSXQ3C1V8 233 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 LAMTOR1Q6IAA8 161 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZNF600Q6ZNG1 722 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 RBPMS2Q6ZRY4 209 aaKnown RBP4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 SLC16A13Q7RTY0 426 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 C12orf45Q8N5I9 185 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR52B4Q8NGK2 314 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR1S2Q8NGQ3 325 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR4X1Q8NH49 305 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 TMEM190Q8WZ59 177 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 ACY3Q96HD9 319 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 PRR25Q96S07 402 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 SEC22CQ9BRL7 303 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZNF436Q9C0F3 470 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 MAGT1Q9H0U3 335 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 TMEM231Q9H6L2 316 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 MRPL27Q9P0M9 148 aaKnown RBP4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 GSKIPQ9P0R6 139 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 PFDN2Q9UHV9 154 aa4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 STRAPQ9Y3F4 350 aaKnown RBP4.12□□□□□ -1.75
HMGB1P40-201ENST00000525121 WI2-2373I1.2A0A1W2PRP0 233 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 TMEM213A2RRL7 107 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZFP92A6NM28 416 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 C15orf62A8K5M9 175 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 INMT-MINDY4F8WBC2 141 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 K7EMT4 169 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 L7N2F9 121 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 SSSCA1O60232 199 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 CLN5O75503 358 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 SCAF4O95104 1147 aaKnown RBP4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 IL5P05113 134 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 CD5P06127 495 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 CTSGP08311 255 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 PVALBP20472 110 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 CBLN1P23435 193 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR10J1P30954 320 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 GPX4P36969 197 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 EIF2B2P49770 351 aaKnown RBP4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 RND2P52198 227 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 VAMP2P63027 116 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 CD69Q07108 199 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 TM4SF20Q53R12 229 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 SPANXN5Q5MJ07 72 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 PVRIGQ6DKI7 326 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 BTNL8Q6UX41 500 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 UNQ9165/PRO28630Q6UXU0 137 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 GSG1LQ6UXU4 331 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 NRARPQ7Z6K4 114 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 HAPLN4Q86UW8 402 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZBTB8BQ8NAP8 495 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 Q8WTZ3 238 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 CACNG8Q8WXS5 425 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 GRAMD2BQ96HH9 432 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 METTL26Q96S19 204 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 RAB40CQ96S21 281 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 CHRDL1Q9BU40 450 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 PSENENQ9NZ42 101 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 SMAD5-AS1Q9Y6J3 95 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 WNK1Q9H4A3 2382 aa4.11□□□□□ -1.75
HMGB1P40-201ENST00000525121 IGHV3OR16-8A0A075B7F1 116 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 TRAV14DV4A0A0A6YYC5 116 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 TRAV25A0A0B4J276 109 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 A0A1W2PS18 150 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR4C46A6NHA9 309 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 SNRPGP15A8MWD9 76 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 F8W735 103 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 H3BP45 60 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 K7EIL1 84 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 CCSO14618 274 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZNF207O43670 478 aaKnown RBP4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 SSNA1O43805 119 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 TMEM50AO95807 157 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 PTTG1O95997 202 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 S100A7P31151 101 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 ADMP35318 185 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 NUP62P37198 522 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms