RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 ZNF689Q96CS4 500 aaPredicted RBP3.81□□□□□ -1.8
PCM1-215ENST00000522275 ABHD14BQ96IU4 210 aa3.81□□□□□ -1.8
PCM1-215ENST00000522275 FAM173AQ9BQD7 235 aa3.81□□□□□ -1.8
PCM1-215ENST00000522275 TMEM59Q9BXS4 323 aa3.81□□□□□ -1.8
PCM1-215ENST00000522275 LIME1Q9H400 295 aa3.81□□□□□ -1.8
PCM1-215ENST00000522275 ZNF331Q9NQX6 463 aaPredicted RBP3.81□□□□□ -1.8
PCM1-215ENST00000522275 KCNIP2Q9NS61 270 aa3.81□□□□□ -1.8
PCM1-215ENST00000522275 SPANXCQ9NY87 97 aa3.81□□□□□ -1.8
PCM1-215ENST00000522275 ARHGEF17Q96PE2 2063 aaPredicted RBP3.8□□□□□ -1.8
PCM1-215ENST00000522275 FAM236DA0A1B0GTK5 79 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 LOC107986453A0A1B0GWG9 222 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 LINC01553A4QN01 128 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 RNF223E7ERA6 249 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 M0R2P5 195 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 RRHO14718 337 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 LMX1BO60663 402 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 STC2O76061 302 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 NKX2-2O95096 273 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 CLDN7O95471 211 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 FAM236CP0DP71 79 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
PCM1-215ENST00000522275 CBLN3Q6UW01 205 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 FAM214BQ7L5A3 538 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 PCP2Q8IVA1 136 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 CIARTQ8N365 385 aaPredicted RBP3.8□□□□□ -1.8
PCM1-215ENST00000522275 C3orf22Q8N5N4 141 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 ZNF525Q8N782 197 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 C8orf31Q8N9H6 132 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 NUP35Q8NFH5 326 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 TMEM222Q9H0R3 208 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 B9D1Q9UPM9 204 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 AGRNO00468 2067 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 A8MWL6 223 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 KLK10O43240 276 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 NUDT14O95848 222 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 IGLV3-25P01717 112 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 SCTP09683 121 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 OR5AL1P0C617 328 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 NPPBP16860 134 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 FXYD4P59646 89 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 C1orf195Q5TG92 126 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 PCSK4Q6UW60 755 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 IL17RELQ6ZVW7 336 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 SLC22A24Q8N4F4 322 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 MAFAQ8NHW3 353 aaPredicted RBP3.8□□□□□ -1.8
PCM1-215ENST00000522275 TAF15Q92804 592 aaKnown RBP eCLIP3.8□□□□□ -1.84e-6■■□□□ 11.5
PCM1-215ENST00000522275 CHCHD1Q96BP2 118 aaKnown RBP3.8□□□□□ -1.8
PCM1-215ENST00000522275 DPH3Q96FX2 82 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 SLC25A39Q9BZJ4 359 aaPredicted RBP3.8□□□□□ -1.8
PCM1-215ENST00000522275 AP5S1Q9NUS5 200 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 FOXA2Q9Y261 457 aaPredicted RBP3.8□□□□□ -1.8
PCM1-215ENST00000522275 SHANK1Q9Y566 2161 aa3.8□□□□□ -1.8
PCM1-215ENST00000522275 USP34Q70CQ2 3546 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 TRAV8-1A0A0A6YYK1 113 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 TRAV8-2A0A0B4J237 113 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 SCO2A0A1W2PP80 73 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 TCRBV4S1A1TA0A5B7 111 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 TMEM89A2RUT3 159 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 RBAKDNA6NC62 111 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 UQCRQO14949 82 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 BGLAPP02818 100 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 CNTFRP26992 372 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 NCBP2P52298 156 aaKnown RBP eCLIP3.79□□□□□ -1.8
PCM1-215ENST00000522275 HHEXQ03014 270 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 FXYD3Q14802 87 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 RRN3P1Q2M238 152 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 C12orf74Q32Q52 190 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 KLF17Q5JT82 389 aaPredicted RBP3.79□□□□□ -1.8
PCM1-215ENST00000522275 MFSD12Q6NUT3 480 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 CEND1Q8N111 149 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 OR9G1Q8NH87 305 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 ACER1Q8TDN7 264 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 IFI27L2Q9H2X8 130 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 LSM4Q9Y4Z0 139 aaKnown RBP3.79□□□□□ -1.8
PCM1-215ENST00000522275 TIMM8BQ9Y5J9 83 aaPredicted RBP3.79□□□□□ -1.8
PCM1-215ENST00000522275 TMEM14AQ9Y6G1 99 aa3.79□□□□□ -1.8
PCM1-215ENST00000522275 CHCHD2Q9Y6H1 151 aaPredicted RBP3.79□□□□□ -1.8
PCM1-215ENST00000522275 TMSB15BA0A087X1C1 80 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 C3orf85A0A1B0GTC6 90 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 NPIPB6E9PJ23 425 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 DHRS3O75911 302 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 ACTL6BO94805 426 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 CLDN14O95500 239 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 NCR2O95944 276 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 OXTP01178 125 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 DEFA4P12838 97 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 HSPE1P61604 102 aaKnown RBP3.78□□□□□ -1.8
PCM1-215ENST00000522275 MARCH3Q86UD3 253 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 C15orf53Q8NAA6 179 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 LINC00526Q96FQ7 95 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 SPACA5Q96QH8 159 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 TMEM131Q92545 1883 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 SSC5DA1L4H1 1573 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 TRBV5-4A0A0C4DH59 114 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 UBE2L5PA0A1B0GUS4 154 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 SMIM27A0A1W2PRY6 76 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 IZUMO1RA6ND01 250 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 CDX4O14627 284 aaPredicted RBP3.78□□□□□ -1.8
PCM1-215ENST00000522275 IGHMP01871 453 aa3.78□□□□□ -1.8
PCM1-215ENST00000522275 CD3EP07766 207 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms