RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 COL27A1Q8IZC6 1860 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 OTOFQ9HC10 1997 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 DSCAML1Q8TD84 2053 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 TRAV36DV7A0A075B6V5 113 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 A0A087X0T9 212 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGHV3-15A0A0B4J1V0 119 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 A0A0J9YW62 118 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 A0A1W2PQD3 144 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 TMEM235A6NFC5 223 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 TLCD2A6NGC4 264 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 C16orf90A8MZG2 172 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 C1orf196B1AJZ1 125 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 H3BPC8 53 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 BUB1B-PAK6H3BSN5 160 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 TP53I11O14683 189 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 OVOL1O14753 267 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 NDUFA2O43678 99 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF73O43830 326 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 CREBL2O60519 120 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 GGCTO75223 188 aaKnown RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 SULT1C4O75897 302 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGHV3-7P01780 117 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 RPS3P23396 243 aaKnown RBP eCLIP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 NFYAP23511 347 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 HLA-DMBP28068 263 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 SRIP30626 198 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 XCL1P47992 114 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 FOXA1P55317 472 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR8B8Q15620 311 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 FKBP1CQ5VVH2 108 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF660Q6AZW8 331 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 NOXRED1Q6NXP6 359 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 IFT20Q8IY31 132 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR4C16Q8NGL9 310 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR8D4Q8NGM9 314 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 PPTC7Q8NI37 304 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 DNAJC9Q8WXX5 260 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 SLAMF6Q96DU3 332 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 YPEL2Q96QA6 119 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 GPX7Q96SL4 187 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 MIEN1Q9BRT3 115 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 YIPF3Q9GZM5 350 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 TMEM133Q9H2Q1 129 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 TPT1P8Q9HAU6 139 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 COPZ2Q9P299 210 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 HSPB8Q9UJY1 196 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF443Q9Y2A4 671 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 MED31Q9Y3C7 131 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 HEY1Q9Y5J3 304 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 SOGA1O94964 1423 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 REREQ9P2R6 1566 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 ATAD5Q96QE3 1844 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 NLRC5Q86WI3 1866 aa1.29□□□□□ -2.2
HMGB1P35-201ENST00000503360 MYH3P11055 1940 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 CHD5Q8TDI0 1954 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 DOCK3Q8IZD9 2030 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 FBN1P35555 2871 aaKnown RBP1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 A0A1B0GU33 70 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 ARRDC5A6NEK1 342 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF860A6NHJ4 632 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 TMEM212A6NML5 194 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 C17orf98A8MV24 154 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 M0R378 163 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 SLC22A1O15245 554 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 CST7O76096 145 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 SOD1P00441 154 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 TRGC2P03986 189 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 SCTP09683 121 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 RNASE2P10153 161 aaKnown RBP1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 CCL5P13501 91 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 LGALS3P17931 250 aaKnown RBP1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 COL8A2P25067 703 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 PSMB8P28062 276 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 CMPK1P30085 196 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 S100A11P31949 105 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 CA5AP35218 305 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 NDUFA6P56556 154 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 EIF3IQ13347 325 aaKnown RBP1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 LINC01554Q52M75 96 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 KPRPQ5T749 579 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 C1orf140Q5VVS0 124 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 MIR17HGQ75NE6 70 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 BPIFA4PQ86YQ2 179 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 PRR15Q8IV56 129 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST3H2BBQ8N257 126 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR8J3Q8NGG0 315 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 TERB2Q8NHR7 220 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 STAG3L4Q8TBR4 150 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 BORCS8Q96FH0 119 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 SCGB3A1Q96QR1 104 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR8B2Q96RD0 313 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 SLC25A21Q9BQT8 299 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 LXNQ9BS40 222 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 TTTY13Q9BZ97 58 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR8D2Q9GZM6 311 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 TCEAL2Q9H3H9 227 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 OSTCQ9NRP0 149 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 NAT8BQ9UHF3 227 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 TRAPPC2LQ9UL33 140 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms