RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 IGHV7-4-1A0A0J9YVY3 117 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 CENPXA8MT69 81 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 ZNF701M0R085 212 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-232ENST00000489053 DNASE2O00115 360 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-232ENST00000489053 TSPAN4O14817 238 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 NXPH3O95157 252 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 IFNA10P01566 189 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 C8orf88P0DMB2 117 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 TFPI2P48307 235 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 EIF2B2P49770 351 aaKnown RBP6.86□□□□□ -1.31
HDAC6-232ENST00000489053 APOC4P55056 127 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 ZNF600Q6ZNG1 722 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 SLC24A4Q8NFF2 622 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 GLYATL2Q8WU03 294 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 GPR146Q96CH1 333 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 GRAMD2BQ96HH9 432 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 CITED4Q96RK1 184 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 RHPN1-AS1Q9BWJ2 59 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 NXF2Q9GZY0 626 aaKnown RBP6.86□□□□□ -1.31
HDAC6-232ENST00000489053 WFDC10AQ9H1F0 79 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 SMPXQ9UHP9 88 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 PAIP2BQ9ULR5 123 aaKnown RBP6.86□□□□□ -1.31
HDAC6-232ENST00000489053 TMEM56-RWDD3S4R434 201 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
HDAC6-232ENST00000489053 IGHV3OR16-13A0A075B7E8 117 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 TRAV30A0A087WSZ9 112 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 IGHV3-74A0A0B4J1X5 117 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 A0A0B4J2A0 478 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 A0A0G2JRQ6 117 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 A0A1W2PS18 150 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 INS-IGF2F8WCM5 200 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 P0C879 139 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 RNASE2P10153 161 aaKnown RBP6.85□□□□□ -1.31
HDAC6-232ENST00000489053 SLC25A4P12235 298 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 NPPCP23582 126 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 NPY1RP25929 384 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 ADMP35318 185 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 CCR6P51684 374 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 SMCO1Q147U7 214 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 STPG3Q8N7X2 389 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 RNASEH2CQ8TDP1 164 aaKnown RBP6.85□□□□□ -1.31
HDAC6-232ENST00000489053 DEDD2Q8WXF8 326 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 GALNT14Q96FL9 552 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 METTL26Q96S19 204 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 SLC25A21Q9BQT8 299 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-232ENST00000489053 UBQLN2Q9UHD9 624 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 SHPKQ9UHJ6 478 aa6.85□□□□□ -1.31
HDAC6-232ENST00000489053 PUS1Q9Y606 427 aaKnown RBP eCLIP6.85□□□□□ -1.31
HDAC6-232ENST00000489053 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-232ENST00000489053 CLN5O75503 358 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 IFNA4P05014 189 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 FABP1P07148 127 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 RPP30P78346 268 aaKnown RBP6.84□□□□□ -1.31
HDAC6-232ENST00000489053 KLF9Q13886 244 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-232ENST00000489053 TMEM187Q14656 261 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 TMEM128Q5BJH2 165 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 TOMM20LQ6UXN7 152 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 TCF24Q7RTU0 167 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 CENPSQ8N2Z9 138 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 GBGT1Q8N5D6 347 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 OR4X1Q8NH49 305 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 LHFPL5Q8TAF8 219 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 DTD1Q8TEA8 209 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 Q8WTZ3 238 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 ACY3Q96HD9 319 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 RNF2Q99496 336 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 RETNQ9HD89 108 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 PRR13Q9NZ81 148 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 PFDN2Q9UHV9 154 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 RABAC1Q9UI14 185 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 V9GYH0 126 aa6.84□□□□□ -1.31
HDAC6-232ENST00000489053 IGHV3-66A0A0C4DH42 116 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 A0A1B0GU03 582 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 LINC00854A0A1B0GVQ3 168 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 DUXBA0A1W2PPF3 345 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 RBMY1BA6NDE4 496 aaKnown RBP6.83□□□□□ -1.32
HDAC6-232ENST00000489053 RBMY1EA6NEQ0 496 aaKnown RBP6.83□□□□□ -1.32
HDAC6-232ENST00000489053 NAP1L6A6NFF2 107 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 CHEK1O14757 476 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 MED6O75586 246 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 TMEM50AO95807 157 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 RBMY1DP0C7P1 496 aaKnown RBP6.83□□□□□ -1.32
HDAC6-232ENST00000489053 RPL35AP18077 110 aaKnown RBP6.83□□□□□ -1.32
HDAC6-232ENST00000489053 OR10J1P30954 320 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 RND2P52198 227 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 RAB11AP62491 216 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 TNFRSF9Q07011 255 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 RBMS2Q15434 407 aaKnown RBP6.83□□□□□ -1.32
HDAC6-232ENST00000489053 C2orf83Q53S99 150 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 ZFAND6Q6FIF0 208 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 Q6ZRM9 215 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 LYZL2Q7Z4W2 148 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 OR1S2Q8NGQ3 325 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 SLC35E1Q96K37 410 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 OR10C1Q96KK4 312 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 SOSTQ9BQB4 213 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 NDUFA13Q9P0J0 144 aa6.83□□□□□ -1.32
HDAC6-232ENST00000489053 U3KQ87 197 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms