RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	TMEM56-RWDD3	S4R434	201 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	IGHV3OR16-13	A0A075B7E8	117 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	IGHV3-74	A0A0B4J1X5	117 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	NPBWR1	P48145	328 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	SPCS3	P61009	180 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	DHODH	Q02127	395 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	MLANA	Q16655	118 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	TMEM268	Q5VZI3	342 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	DUSP18	Q8NEJ0	188 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	OR52E5	Q8NH55	327 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	MCFD2	Q8NI22	146 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	CACNG5	Q9UF02	275 aa		11.14	□□□□□ -0.63
CCNL1-222	ENST00000479596	TRAV14DV4	A0A0A6YYC5	116 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	LCE6A	A0A183	80 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596		A0A1B0GU03	582 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	FABP12	A6NFH5	140 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	OR4C46	A6NHA9	309 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	CORT	O00230	105 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	NOL3	O60936	208 aa	Known RBP	11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	TMEM50A	O95807	157 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	APOH	P02749	345 aa	Predicted RBP	11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	TMEM187	Q14656	261 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	LILRB2	Q8N423	598 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	TMEM170A	Q8WVE7	144 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	ST8SIA2	Q92186	375 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	TRIM63	Q969Q1	353 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	GALNT14	Q96FL9	552 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	VSIR	Q9H7M9	311 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	ENY2	Q9NPA8	101 aa		11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
CCNL1-222	ENST00000479596	SUB1	P53999	127 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
CCNL1-222	ENST00000479596	SUPT4H1	P63272	117 aa	Known RBP	11.12	□□□□□ -0.63
CCNL1-222	ENST00000479596	KLF9	Q13886	244 aa	Predicted RBP	11.12	□□□□□ -0.63
CCNL1-222	ENST00000479596	ZNF600	Q6ZNG1	722 aa		11.12	□□□□□ -0.63
CCNL1-222	ENST00000479596	OR4X1	Q8NH49	305 aa		11.12	□□□□□ -0.63
CCNL1-222	ENST00000479596	SCP2D1	Q9UJQ7	156 aa		11.12	□□□□□ -0.63
CCNL1-222	ENST00000479596		V9GYH0	126 aa		11.12	□□□□□ -0.63
CCNL1-222	ENST00000479596	EPPK1	P58107	5090 aa	Known RBP	11.12	□□□□□ -0.63
CCNL1-222	ENST00000479596	CLN5	O75503	358 aa		11.11	□□□□□ -0.63
CCNL1-222	ENST00000479596	OPRK1	P41145	380 aa		11.11	□□□□□ -0.63
CCNL1-222	ENST00000479596	ZNF124	Q15973	351 aa		11.11	□□□□□ -0.63
CCNL1-222	ENST00000479596	APRG1	Q8IVJ8	170 aa		11.11	□□□□□ -0.63
CCNL1-222	ENST00000479596	IL22RA2	Q969J5	263 aa		11.11	□□□□□ -0.63
CCNL1-222	ENST00000479596	RBM38	Q9H0Z9	239 aa	Known RBP	11.11	□□□□□ -0.63
CCNL1-222	ENST00000479596	MCUB	Q9NWR8	336 aa		11.11	□□□□□ -0.63
CCNL1-222	ENST00000479596	IGKV3-7	A0A075B6H7	116 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	NXPH3	O95157	252 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	IGKV1-17	P01599	117 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	HTR2B	P41595	481 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	TFPI2	P48307	235 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	ZNF79	Q15937	498 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	C2orf83	Q53S99	150 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	NMS	Q5H8A3	153 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596		Q6ZWC4	215 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	TCF24	Q7RTU0	167 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	GBGT1	Q8N5D6	347 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	GINS3	Q9BRX5	216 aa		11.1	□□□□□ -0.63
CCNL1-222	ENST00000479596	IGHV3-66	A0A0C4DH42	116 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	KIR2DL5B	A0A0G2JN68	375 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	KIR2DL5B	A0A0G2JPC4	375 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	RPL35A	P18077	110 aa	Known RBP	11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	APOC4	P55056	127 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	DEFB135	Q30KP9	77 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	TIGIT	Q495A1	244 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	LYZL2	Q7Z4W2	148 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	WFDC3	Q8IUB2	231 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	KIR2DL5A	Q8N109	375 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	SLC24A4	Q8NFF2	622 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	KIR2DL5B	Q8NHK3	375 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	MAP6D1	Q9H9H5	199 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	HEYL	Q9NQ87	328 aa	Predicted RBP	11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596	TP53TG1	Q9Y2A0	90 aa		11.09	□□□□□ -0.63
CCNL1-222	ENST00000479596		A0A0B4J2A0	478 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	CEBPZOS	A8MTT3	80 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	SPRY2	O43597	315 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	DFFB	O76075	338 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	SULT1A3	P0DMM9	295 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	SULT1A4	P0DMN0	295 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	AKR1C4	P17516	323 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	PRSS54	Q6PEW0	395 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	CCDC190	Q86UF4	302 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	FAM24B	Q8N5W8	94 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	IL17D	Q8TAD2	202 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	SCGB3A2	Q96PL1	93 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	MS4A6A	Q9H2W1	248 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	SHPK	Q9UHJ6	478 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	KCNIP3	Q9Y2W7	256 aa		11.08	□□□□□ -0.64
CCNL1-222	ENST00000479596	UBE2C	O00762	179 aa		11.07	□□□□□ -0.64
CCNL1-222	ENST00000479596	IGLC1	P0CG04	106 aa		11.07	□□□□□ -0.64
CCNL1-222	ENST00000479596	CRYBB3	P26998	211 aa		11.07	□□□□□ -0.64
CCNL1-222	ENST00000479596	PYDC2	Q56P42	97 aa		11.07	□□□□□ -0.64
CCNL1-222	ENST00000479596	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.07	□□□□□ -0.64
CCNL1-222	ENST00000479596	RNF183	Q96D59	192 aa		11.07	□□□□□ -0.64
CCNL1-222	ENST00000479596	HSPB7	Q9UBY9	170 aa		11.07	□□□□□ -0.64
CCNL1-222	ENST00000479596		A0A0J9YWU9	116 aa		11.06	□□□□□ -0.64
CCNL1-222	ENST00000479596	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.06	□□□□□ -0.64
CCNL1-222	ENST00000479596	CD5	P06127	495 aa		11.06	□□□□□ -0.64
CCNL1-222	ENST00000479596	NPY1R	P25929	384 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms