RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 IFNA4P05014 189 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 CLEC3BP05452 202 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 OR8U8P0C7N1 319 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 HOXD3P31249 432 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-206ENST00000470241 SLURP1P55000 103 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 MFAP4P55083 255 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 RAB11AP62491 216 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 VAMP2P63027 116 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 CD69Q07108 199 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 FAM209BQ5JX69 171 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 PRR31Q5SQ13 230 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 ACSM6Q6P461 480 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 PRSS54Q6PEW0 395 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 LINC00482Q8N8I6 264 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 ATP6V0BQ99437 205 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 RNF126Q9BV68 326 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 ZNF436Q9C0F3 470 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-206ENST00000470241 ZC4H2Q9NQZ6 224 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 PAIP2BQ9ULR5 123 aaKnown RBP8.11□□□□□ -1.11
SMC1A-206ENST00000470241 RPS10-NUDT3A0A1W2PQS6 291 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 FAM24AA6NFZ4 105 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 OR2T8A6NH00 312 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 TGOLN2O43493 480 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 GGCTO75223 188 aaKnown RBP8.1□□□□□ -1.11
SMC1A-206ENST00000470241 MPC2O95563 127 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 GIPP09681 153 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-206ENST00000470241 METTL15P1P0C7V9 234 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 PVALBP20472 110 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-206ENST00000470241 ADMP35318 185 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 ARL3P36405 182 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 GPX4P36969 197 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-206ENST00000470241 Q56UQ5 140 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 SLC16A13Q7RTY0 426 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 HAPLN4Q86UW8 402 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 UBAC2Q8NBM4 344 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 OR4X1Q8NH49 305 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 CHAC2Q8WUX2 184 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 ZNF414Q96IQ9 312 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 TXN2Q99757 166 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 CHRDL1Q9BU40 450 aa8.1□□□□□ -1.11
SMC1A-206ENST00000470241 TRAV14DV4A0A0A6YYC5 116 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 IGSF23A1L1A6 192 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 E5RGE8 158 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 CLN5O75503 358 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 OR2C1O95371 312 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 RLN2P04090 185 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 CTSGP08311 255 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 SLC25A4P12235 298 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 ZP3P21754 424 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 NPBWR1P48145 328 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 BCAP31P51572 246 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 CAV2P51636 162 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 RND2P52198 227 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 ARL16Q0P5N6 197 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 KLF5Q13887 457 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-206ENST00000470241 RPEL1Q2QD12 228 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 ETFRF1Q6IPR1 90 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 TMEM252Q8N6L7 170 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 TMEM116Q8NCL8 245 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 WFDC9Q8NEX5 89 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 DCUN1D4Q92564 292 aa8.09□□□□□ -1.11
SMC1A-206ENST00000470241 DLX4Q92988 240 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-206ENST00000470241 BSCL2Q96G97 398 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-206ENST00000470241 LYRM2Q9NU23 88 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-206ENST00000470241 GAR1Q9NY12 217 aaKnown RBP8.09□□□□□ -1.11
SMC1A-206ENST00000470241 GNG7O60262 68 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 P2RY1P47900 373 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 GAMTQ14353 236 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 Q5BKY6 102 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 OR8G2PQ6IF36 304 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 SPSB3Q6PJ21 355 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 ACOT7LQ6ZUV0 252 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 GPHB5Q86YW7 130 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 ASB13Q8WXK3 278 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 NPIPB3Q92617 1050 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 ACY3Q96HD9 319 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 MBD2Q9UBB5 411 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 CMYA5Q8N3K9 4069 aa8.08□□□□□ -1.12
SMC1A-206ENST00000470241 IGHV3-35A0A0C4DH35 117 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 G3V3Q6 166 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 NUPL2O15504 423 aaKnown RBP8.07□□□□□ -1.12
SMC1A-206ENST00000470241 CST7O76096 145 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 IGKV1-17P01599 117 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 IGLC1P0CG04 106 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 LYL1P12980 280 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 SYNJ2BPP57105 145 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 RAP2BP61225 183 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 TIGITQ495A1 244 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 TREML4Q6UXN2 200 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 UNQ9165/PRO28630Q6UXU0 137 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 C1QL4Q86Z23 238 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 OR10P1Q8NGE3 313 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 SLC35E1Q96K37 410 aa8.07□□□□□ -1.12
SMC1A-206ENST00000470241 IGKV1D-37A0A075B6S9 117 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 TRAV30A0A087WSZ9 112 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 A0A1B0GVG6 124 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 OVOL1O14753 267 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 PET100P0DJ07 73 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms