RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 OBSL1O75147 1896 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 SCN8AQ9UQD0 1980 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 MCM3APO60318 1980 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 TRAV9-1A0A075B6T8 112 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 IGKV2-40A0A087WW87 121 aaPredicted RBP0.89□□□□□ -2.27
SMC4-205ENST00000465563 IFNA10P01566 189 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 IGKV2D-40P01614 121 aaPredicted RBP0.89□□□□□ -2.27
SMC4-205ENST00000465563 COX6A1P12074 109 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 FKBP2P26885 142 aaKnown RBP0.89□□□□□ -2.27
SMC4-205ENST00000465563 DEFA1P59665 94 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.89□□□□□ -2.27
SMC4-205ENST00000465563 AAED1Q7RTV5 226 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 ZNF565Q8N9K5 539 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 TMEM147Q9BVK8 224 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 DCSTAMPQ9H295 470 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 KIF1BO60333 1816 aa0.89□□□□□ -2.27
SMC4-205ENST00000465563 C19orf84I3L1E1 186 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 OR2T1O43869 369 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 RPP14O95059 124 aaKnown RBP0.88□□□□□ -2.27
SMC4-205ENST00000465563 ZNF682O95780 498 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 HAND1O96004 215 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 CDKN2CP42773 168 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 CCL7P80098 99 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 SURF2Q15527 256 aaPredicted RBP0.88□□□□□ -2.27
SMC4-205ENST00000465563 C12orf74Q32Q52 190 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 SPOPLQ6IQ16 392 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 BPIFA4PQ86YQ2 179 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 CLVS1Q8IUQ0 354 aaPredicted RBP0.88□□□□□ -2.27
SMC4-205ENST00000465563 WFDC11Q8NEX6 87 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 OR4D11Q8NGI4 311 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 MIXL1Q9H2W2 232 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 IDI2-AS1Q9NZ38 188 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 PIK3C2GO75747 1445 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 NCOA1Q15788 1441 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 RIC1Q4ADV7 1423 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 NOTCH1P46531 2555 aa0.88□□□□□ -2.27
SMC4-205ENST00000465563 PLXNA4Q9HCM2 1894 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 A0A0D9SG52 128 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 OR5F1O95221 314 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 MIFP14174 115 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 CEBPGP53567 150 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 ERVS71-1P61550 626 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 EDDM3AQ14507 147 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 LINC01554Q52M75 96 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 SIGLECL1Q8N7X8 197 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 MNS1Q8NEH6 495 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 AQP3Q92482 292 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 BORCS7Q96B45 105 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 ULBP3Q9BZM4 244 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 RNASE7Q9H1E1 156 aaKnown RBP0.87□□□□□ -2.27
SMC4-205ENST00000465563 SLC22A13Q9Y226 551 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 ERGIC3Q9Y282 383 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 PRELID3BQ9Y3B1 194 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 CCDC144AA2RUR9 1427 aa0.87□□□□□ -2.27
SMC4-205ENST00000465563 HEATR1Q9H583 2144 aaKnown RBP0.86□□□□□ -2.27
SMC4-205ENST00000465563 hADV38S2A0JD32 116 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 C2orf70A6NJV1 201 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 FADS1O60427 444 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 CRYZL1O95825 349 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 CTXN2P0C2S0 81 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 SPI1P17947 270 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 HIST1H3AP68431 136 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 H3F3AP84243 136 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 SRSF6Q13247 344 aaKnown RBP0.86□□□□□ -2.27
SMC4-205ENST00000465563 PDE6HQ13956 83 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 TMEM97Q5BJF2 176 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 OR6V1Q8N148 313 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 HIST3H2BBQ8N257 126 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 C12orf29Q8N999 325 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 GDPD1Q8N9F7 314 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 OR5A1Q8NGJ0 315 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 SLC50A1Q9BRV3 221 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 OR51V1Q9H2C8 321 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 RNF122Q9H9V4 155 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 C14orf105Q9NVL8 296 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 UBAP1Q9NZ09 502 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 KIAA1549Q9HCM3 1950 aa0.86□□□□□ -2.27
SMC4-205ENST00000465563 PIRO00625 290 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 TCL1BO95988 128 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 RBP1P09455 135 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 ASAH2BP0C7U1 165 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 PLCXD2Q0VAA5 305 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 CDK10Q15131 360 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 RHEBQ15382 184 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 ARHGEF28Q8N1W1 1705 aaKnown RBP0.85□□□□□ -2.27
SMC4-205ENST00000465563 OR52L1Q8NGH7 329 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 CT55Q8WUE5 264 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 SERPINI1Q99574 410 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 TLNRD1Q9H1K6 362 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 TRABDQ9H4I3 376 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 SLC39A9Q9NUM3 307 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 CYSLTR1Q9Y271 337 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
SMC4-205ENST00000465563 CASP8AP2Q9UKL3 1982 aa0.85□□□□□ -2.27
SMC4-205ENST00000465563 TRAV14DV4A0A0A6YYC5 116 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 FUOMA2VDF0 154 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 E2F6O75461 281 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 TEX36Q5VZQ5 186 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 LINC00311Q8N616 119 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 OR4E2Q8NGC2 313 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms