RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 IGHV3-23P01764 117 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 IFNA4P05014 189 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 CLEC3BP05452 202 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 ARL3P36405 182 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 OPRK1P41145 380 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 NPBWR1P48145 328 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 FHL3Q13643 280 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 RGS21Q2M5E4 152 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 FAM106AQ4KMX7 169 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 ACSM6Q6P461 480 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 UBAC2Q8NBM4 344 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 RNASEH2CQ8TDP1 164 aaKnown RBP9.63□□□□□ -0.87
HDAC4-207ENST00000461113 TXN2Q99757 166 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 PAIP2BQ9ULR5 123 aaKnown RBP9.63□□□□□ -0.87
HDAC4-207ENST00000461113 IGHV3-21A0A0B4J1V1 117 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 NUPL2O15504 423 aaKnown RBP9.62□□□□□ -0.87
HDAC4-207ENST00000461113 MT-CO2P00403 227 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 RNASE2P10153 161 aaKnown RBP9.62□□□□□ -0.87
HDAC4-207ENST00000461113 SLURP1P55000 103 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 C2orf83Q53S99 150 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 C9orf66Q5T8R8 295 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 SPSB3Q6PJ21 355 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 ZBTB8BQ8NAP8 495 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-207ENST00000461113 ZNF502Q8TBZ5 544 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 SCARB1Q8WTV0 552 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 DCUN1D4Q92564 292 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 BSCL2Q96G97 398 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-207ENST00000461113 C2orf50Q96LR7 162 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 OR4C12Q96R67 309 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 S4R3C0 116 aa9.62□□□□□ -0.87
HDAC4-207ENST00000461113 MFSD2BA6NFX1 497 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 SEC14L6B5MCN3 397 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 L7N2F9 121 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 GNG7O60262 68 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 IAPPP10997 89 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 PVALBP20472 110 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-207ENST00000461113 GPR183P32249 361 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 MFAP2P55001 183 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 VAMP2P63027 116 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 ID3Q02535 119 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 RELQ04864 619 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-207ENST00000461113 ZFAND6Q6FIF0 208 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 DLX4Q92988 240 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-207ENST00000461113 MAGT1Q9H0U3 335 aa9.61□□□□□ -0.87
HDAC4-207ENST00000461113 ZNF320A2RRD8 509 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 OR2T8A6NH00 312 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 PPP5D1E7EU14 171 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 I3L2K1 104 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 K7EIM0 57 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 CCSO14618 274 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 TGOLN2O43493 480 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 SLC25A4P12235 298 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 INSL3P51460 131 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 SYNJ2BPP57105 145 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 CYCSP99999 105 aaKnown RBP9.6□□□□□ -0.87
HDAC4-207ENST00000461113 KLF5Q13887 457 aaPredicted RBP9.6□□□□□ -0.87
HDAC4-207ENST00000461113 OR4D5Q8NGN0 318 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 RAB40CQ96S21 281 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 PSENENQ9NZ42 101 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 STRAPQ9Y3F4 350 aaKnown RBP9.6□□□□□ -0.87
HDAC4-207ENST00000461113 LSM4Q9Y4Z0 139 aaKnown RBP9.6□□□□□ -0.87
HDAC4-207ENST00000461113 DMRT1Q9Y5R6 373 aa9.6□□□□□ -0.87
HDAC4-207ENST00000461113 TRAV30A0A087WSZ9 112 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 MPTX1A8MV57 137 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 BMPR1BO00238 502 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 GOSR2O14653 212 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 SSSCA1O60232 199 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 SAP30O75446 220 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 OR2C1O95371 312 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 TRBV12-3P01733 135 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 RLN2P04090 185 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 FCGR2BP31994 310 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-207ENST00000461113 POLR2GP62487 172 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDAC4-207ENST00000461113 BSXQ3C1V8 233 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 SPANXN5Q5MJ07 72 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 ADAMTSL5Q6ZMM2 481 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 GPHB5Q86YW7 130 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 OR9G4Q8NGQ1 327 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 SLC35E1Q96K37 410 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 OR10C1Q96KK4 312 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 CCDC140Q96MF4 163 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 STARD9Q9P2P6 4700 aa9.59□□□□□ -0.87
HDAC4-207ENST00000461113 CSMD3Q7Z407 3707 aa9.58□□□□□ -0.88
HDAC4-207ENST00000461113 GPX4P36969 197 aaPredicted RBP9.58□□□□□ -0.88
HDAC4-207ENST00000461113 TAS2R30P59541 319 aa9.58□□□□□ -0.88
HDAC4-207ENST00000461113 PVRIGQ6DKI7 326 aa9.58□□□□□ -0.88
HDAC4-207ENST00000461113 SMIM8Q96KF7 97 aa9.58□□□□□ -0.88
HDAC4-207ENST00000461113 ZC4H2Q9NQZ6 224 aa9.58□□□□□ -0.88
HDAC4-207ENST00000461113 UFC1Q9Y3C8 167 aa9.58□□□□□ -0.88
HDAC4-207ENST00000461113 LSM5Q9Y4Y9 91 aaKnown RBP9.58□□□□□ -0.88
HDAC4-207ENST00000461113 LGALS9O00182 355 aa9.57□□□□□ -0.88
HDAC4-207ENST00000461113 YIF1AO95070 293 aa9.57□□□□□ -0.88
HDAC4-207ENST00000461113 SCAF4O95104 1147 aaKnown RBP9.57□□□□□ -0.88
HDAC4-207ENST00000461113 IGHV3-48P01763 117 aa9.57□□□□□ -0.88
HDAC4-207ENST00000461113 SPNP16150 400 aa9.57□□□□□ -0.88
HDAC4-207ENST00000461113 BCAP31P51572 246 aa9.57□□□□□ -0.88
HDAC4-207ENST00000461113 S100A10P60903 97 aa9.57□□□□□ -0.88
HDAC4-207ENST00000461113 OR4X1Q8NH49 305 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms