RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PPP1R27Q86WC6 154 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 HIST3H2BBQ8N257 126 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 TMEM37Q8WXS4 190 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 PERPQ96FX8 193 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 EAF1Q96JC9 268 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-218ENST00000439806 TRGV9Q99603 122 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 PAXXQ9BUH6 204 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 SLC25A2Q9BXI2 301 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 NIT2Q9NQR4 276 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 TNFRSF19Q9NS68 423 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 ZNF355PQ9NSJ1 428 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 PITPNC1Q9UKF7 332 aa8.37□□□□□ -1.07
CPNE1-218ENST00000439806 TRBV20OR9-2A0A075B6H5 130 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 IGKV1D-37A0A075B6S9 117 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 TRAV5A0A0B4J249 113 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 PSMB11A5LHX3 300 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 LY6LH3BQJ8 138 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 PHOX2AO14813 284 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 MOSP00540 346 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 CRYGCP07315 174 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 SOD3P08294 240 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 GPR6P46095 362 aaPredicted RBP8.36□□□□□ -1.07
CPNE1-218ENST00000439806 ARF6P62330 175 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
CPNE1-218ENST00000439806 PAX2Q02962 417 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 LY6DQ14210 128 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 SSX2Q16385 188 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 TIGITQ495A1 244 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 CENPWQ5EE01 88 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 PVRIGQ6DKI7 326 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 SGMS2Q8NHU3 365 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 SRSF12Q8WXF0 261 aaKnown RBP8.36□□□□□ -1.07
CPNE1-218ENST00000439806 OR51M1Q9H341 326 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 IL36BQ9NZH7 164 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 MRPL36Q9P0J6 103 aaKnown RBP8.36□□□□□ -1.07
CPNE1-218ENST00000439806 DPM3Q9P2X0 92 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 F11RQ9Y624 299 aaKnown RBP8.36□□□□□ -1.07
CPNE1-218ENST00000439806 MALRD1Q5VYJ5 2156 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 PKDREJQ9NTG1 2253 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 MUC3AQ02505 3323 aa8.36□□□□□ -1.07
CPNE1-218ENST00000439806 TRAV9-1A0A075B6T8 112 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 TIMM23O14925 209 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 CNIH1O95406 144 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 APELAP0DMC3 54 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 ZNF90Q03938 601 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 FOXL1Q12952 345 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 KLRD1Q13241 179 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 MMDQ15546 238 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 MORN5Q5VZ52 161 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 DTX2Q86UW9 622 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 OR11H6Q8NGC7 330 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 OR1B1Q8NGR6 318 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 FAM167A-AS1Q96KT0 104 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 SRSF8Q9BRL6 282 aaKnown RBP8.35□□□□□ -1.07
CPNE1-218ENST00000439806 GPR61Q9BZJ8 451 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 PRORYQ9H606 182 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 TRAPPC1Q9Y5R8 145 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 AKAP13Q12802 2813 aa8.35□□□□□ -1.07
CPNE1-218ENST00000439806 IGHV3-21A0A0B4J1V1 117 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 XKRY2A2RUG3 117 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 GGTLC3B5MD39 225 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 TEX22C9J3V5 150 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 K7EN84 100 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 NBR2O15453 112 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 PYYP10082 97 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 ORM2P19652 201 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 CNN1P51911 297 aaKnown RBP8.34□□□□□ -1.07
CPNE1-218ENST00000439806 MFAP2P55001 183 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 ERVFC1-1P60608 527 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 RPL19P84098 196 aaKnown RBP8.34□□□□□ -1.07
CPNE1-218ENST00000439806 RPEL1Q2QD12 228 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 GFI1BQ5VTD9 330 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 UNQ6494/PRO21346Q6UXR6 183 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 PATE2Q6UY27 113 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 LINC00305Q7Z4B0 112 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 STXBP6Q8NFX7 210 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 UBTD1Q9HAC8 227 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 HILPDAQ9Y5L2 63 aa8.34□□□□□ -1.07
CPNE1-218ENST00000439806 CELSR3Q9NYQ7 3312 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 A0A1W2PRD5 423 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 A0A1W2PRF3 423 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 A0A1W2PRM7 423 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 ODF3BA8MYP8 253 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 SLC17A3O00476 420 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 HYPMO75409 117 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 MGST1P10620 155 aaKnown RBP8.33□□□□□ -1.08
CPNE1-218ENST00000439806 FABP4P15090 132 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 PRTN3P24158 256 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 CDKN1AP38936 164 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 TAS2R60P59551 318 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 HES1Q14469 280 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 C19orf35Q6ZS72 473 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 KIR3DL3Q8N743 410 aa8.33□□□□□ -1.08
CPNE1-218ENST00000439806 RP1L1Q8IWN7 2480 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms