RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 IFNA17P01571 189 aa13.23□□□□□ -0.29
GTF3A-204ENST00000438571 GIG44P09565 113 aaPredicted RBP13.23□□□□□ -0.29
GTF3A-204ENST00000438571 SNCAP37840 140 aa13.23□□□□□ -0.29
GTF3A-204ENST00000438571 HOXA1P49639 335 aaPredicted RBP13.23□□□□□ -0.29
GTF3A-204ENST00000438571 RPL11P62913 178 aaKnown RBP13.23□□□□□ -0.29
GTF3A-204ENST00000438571 PAFAH1B2P68402 229 aa13.23□□□□□ -0.29
GTF3A-204ENST00000438571 RNASE10Q5GAN6 216 aaKnown RBP13.23□□□□□ -0.29
GTF3A-204ENST00000438571 Q8NAQ8 132 aa13.23□□□□□ -0.29
GTF3A-204ENST00000438571 C3orf85A0A1B0GTC6 90 aa13.22□□□□□ -0.29
GTF3A-204ENST00000438571 C4BPBP20851 252 aa13.22□□□□□ -0.29
GTF3A-204ENST00000438571 TMEM187Q14656 261 aa13.22□□□□□ -0.29
GTF3A-204ENST00000438571 Q6ZRM9 215 aa13.22□□□□□ -0.29
GTF3A-204ENST00000438571 ZNF486Q96H40 463 aaPredicted RBP13.22□□□□□ -0.29
GTF3A-204ENST00000438571 EXTL2Q9UBQ6 330 aa13.22□□□□□ -0.29
GTF3A-204ENST00000438571 KIAA1109Q2LD37 5005 aa13.22□□□□□ -0.29
GTF3A-204ENST00000438571 KNCNA6PVL3 124 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 K7EQG2 157 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 CLN5O75503 358 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 ZNF688P0C7X2 276 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 OPRK1P41145 380 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 TRIM16LQ309B1 348 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 TIGITQ495A1 244 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 FAAP20Q6NZ36 180 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 TRPT1Q86TN4 253 aaKnown RBP13.21□□□□□ -0.29
GTF3A-204ENST00000438571 STXBP6Q8NFX7 210 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 OR13C8Q8NGS7 320 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 LHFPL5Q8TAF8 219 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 ABHD1Q96SE0 405 aa13.21□□□□□ -0.29
GTF3A-204ENST00000438571 TRAV2A0A0B4J234 112 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 RBMY1A1P0DJD3 496 aaKnown RBP13.2□□□□□ -0.3
GTF3A-204ENST00000438571 RBMY1CP0DJD4 496 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 UCP1P25874 307 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 RBMY1FQ15415 496 aaKnown RBP13.2□□□□□ -0.3
GTF3A-204ENST00000438571 BSXQ3C1V8 233 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 STHQ8IWL8 128 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 ARRDC1Q8N5I2 433 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 MARCH1Q8TCQ1 289 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 PDCD10Q9BUL8 212 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 MFFQ9GZY8 342 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 MTFP1Q9UDX5 166 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 FAT2Q9NYQ8 4349 aa13.2□□□□□ -0.3
GTF3A-204ENST00000438571 IGHV4-28A0A0C4DH34 117 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 CORTO00230 105 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 IGKV1-17P01599 117 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 NPPCP23582 126 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 CRYBB3P26998 211 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 P2RY1P47900 373 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 RORCP51449 518 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 SCGB2B2Q4G0G5 96 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 OR4X1Q8NH49 305 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 COPZ2Q9P299 210 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 DNAH2Q9P225 4427 aa13.19□□□□□ -0.3
GTF3A-204ENST00000438571 DNAH17Q9UFH2 4485 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 CD74P04233 296 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 CD5P06127 495 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 SMIM18P0DKX4 95 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 CTF1Q16619 201 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 C2CD4CQ8TF44 421 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 DCANP1Q8TF63 244 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 METTL26Q96S19 204 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 APLNQ9ULZ1 77 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 X6R8D5 127 aa13.18□□□□□ -0.3
GTF3A-204ENST00000438571 GABARAPO95166 117 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 IFNA4P05014 189 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 OR5AC1P0C628 307 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 CCDC71LQ8N9Z2 235 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 RNASE11Q8TAA1 199 aaKnown RBP13.17□□□□□ -0.3
GTF3A-204ENST00000438571 TMEM170AQ8WVE7 144 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 TMEM230Q96A57 120 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 MIXL1Q9H2W2 232 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 TMEM231Q9H6L2 316 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 ENY2Q9NPA8 101 aa13.17□□□□□ -0.3
GTF3A-204ENST00000438571 ELOA3CA0A087WX78 387 aaPredicted RBP13.16□□□□□ -0.3
GTF3A-204ENST00000438571 IGLL5B9A064 214 aa13.16□□□□□ -0.3
GTF3A-204ENST00000438571 NXPH3O95157 252 aa13.16□□□□□ -0.3
GTF3A-204ENST00000438571 RAB3DO95716 219 aa13.16□□□□□ -0.3
GTF3A-204ENST00000438571 RPL5P46777 297 aaKnown RBP13.16□□□□□ -0.3
GTF3A-204ENST00000438571 SUB1P53999 127 aaKnown RBP eCLIP13.16□□□□□ -0.3
GTF3A-204ENST00000438571 MZT2AQ6P582 158 aa13.16□□□□□ -0.3
GTF3A-204ENST00000438571 TMEM229BQ8NBD8 167 aa13.16□□□□□ -0.3
GTF3A-204ENST00000438571 TERB2Q8NHR7 220 aa13.16□□□□□ -0.3
GTF3A-204ENST00000438571 RRNAD1Q96FB5 475 aaKnown RBP13.16□□□□□ -0.3
GTF3A-204ENST00000438571 U3KQE9 123 aa13.16□□□□□ -0.3
GTF3A-204ENST00000438571 PCLOQ9Y6V0 5065 aa13.16□□□□□ -0.3
GTF3A-204ENST00000438571 A0A1W2PS18 150 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 ATG12O94817 140 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 ZNF182P17025 639 aaPredicted RBP13.15□□□□□ -0.3
GTF3A-204ENST00000438571 TBPP20226 339 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 RND2P52198 227 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 TAS2R19P59542 299 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 MEF2DQ14814 521 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 AARDQ4LEZ3 155 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 ACTL10Q5JWF8 245 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 STEAP1BQ6NZ63 245 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 Q6ZTC4 211 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 ZFAND1Q8TCF1 268 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 GLYATL2Q8WU03 294 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms