RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 RARRES2Q99969 163 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 ATG101Q9BSB4 218 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 TMEM70Q9BUB7 260 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 TUBA4BQ9H853 241 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 MUC22E2RYF6 1773 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-205ENST00000414879 TRAV40A0A0B4J280 105 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 J3QLI3 93 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 IGLV3-1P01715 115 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 SUPT4H1P63272 117 aaKnown RBP9.85□□□□□ -0.83
PTPRF-205ENST00000414879 C5orf64Q2M2E5 130 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 TMEM14EPQ6UXP3 125 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 HAX1O00165 279 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 LEPP41159 167 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 SPRY4Q9C004 299 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 IL36BQ9NZH7 164 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 TRBV7-1A0A0A6YYK4 115 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 A0A1B0GW64 132 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 ASIPP42127 132 aa9.85□□□□□ -0.83
PTPRF-205ENST00000414879 ICE1Q9Y2F5 2266 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 C1QTNF9BB2RNN3 333 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 CGAP01215 116 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
PTPRF-205ENST00000414879 BIVMQ86UB2 503 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 ERVK11-1P61568 191 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 KIR3DL3Q8N743 410 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 MRPL18Q9H0U6 180 aaKnown RBP9.84□□□□□ -0.83
PTPRF-205ENST00000414879 FAM215AQ9Y5M1 114 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 A0A1B0GWJ7 208 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 OVOL1O14753 267 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 SPTBN2O15020 2390 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 UBE2E1P51965 193 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 FAM223BA6NKX1 122 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 H0YIZ8 118 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
PTPRF-205ENST00000414879 FAM223AQ8IWN6 122 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 AURKAIP1Q9NWT8 199 aaPredicted RBP9.84□□□□□ -0.83
PTPRF-205ENST00000414879 KAAG1Q9UBP8 84 aa9.84□□□□□ -0.83
PTPRF-205ENST00000414879 LYL1P12980 280 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 EAF1Q96JC9 268 aaPredicted RBP9.83□□□□□ -0.84
PTPRF-205ENST00000414879 KIR2DL4Q99706 377 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 Q9H3A6 140 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 KIF26AQ9ULI4 1882 aaPredicted RBP9.83□□□□□ -0.84
PTPRF-205ENST00000414879 OR4C46A6NHA9 309 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 Q1RN00 199 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 DLX1P56177 255 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 PAX8Q06710 450 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 OR10AG1Q8NH19 301 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 DENND4AQ7Z401 1863 aa9.83□□□□□ -0.84
PTPRF-205ENST00000414879 C5orf63A6NC05 138 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 FHITP49789 147 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 Q8NFD4 153 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 C2orf16Q68DN1 1984 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 CACNA1DQ01668 2161 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 FOXI3A8MTJ6 420 aaPredicted RBP9.82□□□□□ -0.84
PTPRF-205ENST00000414879 MIR17HGQ75NE6 70 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 PGLYRP4Q96LB8 373 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 RPP21Q9H633 154 aaKnown RBP9.82□□□□□ -0.84
PTPRF-205ENST00000414879 SDF2L1Q9HCN8 221 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 OSTCQ9NRP0 149 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 F11RQ9Y624 299 aaKnown RBP9.82□□□□□ -0.84
PTPRF-205ENST00000414879 A0A1B0GUT8 65 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 LINC01549A6NIU2 74 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 FABP5P3A8MUU1 101 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 LILRA1O75019 489 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 SP5Q6BEB4 398 aaPredicted RBP9.82□□□□□ -0.84
PTPRF-205ENST00000414879 LYPD1Q8N2G4 141 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 C8orf31Q8N9H6 132 aa9.82□□□□□ -0.84
PTPRF-205ENST00000414879 UBE2L6O14933 153 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 IGKV1-5P01602 117 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 AMMECR1LQ6DCA0 310 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 C1orf122Q6ZSJ8 110 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 SGK494Q96LW2 274 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 SIGLEC9Q9Y336 463 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 TCAPO15273 167 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 TREML4Q6UXN2 200 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 IMMP2LQ96T52 175 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 EPDR1Q9UM22 224 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 COL8A2P25067 703 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 VAMP3Q15836 100 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 SCGB1D4Q6XE38 83 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 Q6ZSR3 168 aa9.81□□□□□ -0.84
PTPRF-205ENST00000414879 A6NDN8 102 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 LEPROTL1O95214 131 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 IGHV3-48P01763 117 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 MSMBP08118 114 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 SELLP14151 372 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 ZNF383Q8NA42 475 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 C1orf147Q96MC9 270 aaPredicted RBP9.8□□□□□ -0.84
PTPRF-205ENST00000414879 DKK4Q9UBT3 224 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 PSMB11A5LHX3 300 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 DIRC3C9JPN6 131 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 TRGC2P03986 189 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 RSPO3Q9BXY4 272 aaPredicted RBP9.8□□□□□ -0.84
PTPRF-205ENST00000414879 GPR61Q9BZJ8 451 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 INTS1Q8N201 2190 aaKnown RBP9.8□□□□□ -0.84
PTPRF-205ENST00000414879 CACNG7P62955 275 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 GGTLC1Q9BX51 225 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms