RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 SIGLEC9Q9Y336 463 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SNX24Q9Y343 169 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 RHBDD3Q9Y3P4 386 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ENPP4Q9Y6X5 453 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 S4R3C0 116 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HSPE1-MOB4S4R3N1 261 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 EXPH5Q8NEV8 1989 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 NACAE9PAV3 2078 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HEATR1Q9H583 2144 aaKnown RBP1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 FRAS1Q86XX4 4008 aa1.55□□□□□ -2.16
RNU6-1140P-201ENST00000410517 IGKV1D-42A0A075B6H8 117 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 IGHV3-72A0A0B4J1Y9 119 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ODF3BA8MYP8 253 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 M0R135 149 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 M0R1X1 148 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CXCR6O00574 342 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OVOL1O14753 267 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SIVA1O15304 175 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 RGS5O15539 181 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 NOS1APO75052 506 aaPredicted RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CCNKO75909 580 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CPSF4O95639 269 aaKnown RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 LY6G6CO95867 125 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CYB5AP00167 134 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CST4P01036 141 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 NPPAP01160 153 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 IGHG2P01859 326 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GYPAP02724 150 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CRYGCP07315 174 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CD14P08571 375 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF728P0DKX0 622 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 PRKACBP22694 351 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 IL3RAP26951 378 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CNTFRP26992 372 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ERP29P30040 261 aaKnown RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GPR4P46093 362 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GALR1P47211 349 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 RPL14P50914 215 aaKnown RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HCCSP53701 268 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 FOXA1P55317 472 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SMIM11AP58511 58 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TAS2R41P59536 307 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TAS2R43P59537 309 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GNG3P63215 75 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HIST1H3AP68431 136 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CDK6Q00534 326 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 RPL18Q07020 188 aaKnown RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF616Q08AN1 781 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 APOFQ13790 326 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 LY6EQ16553 131 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 Q3ZCU0 254 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 C6orf99Q4VX62 202 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GCSAMLQ5JQS6 135 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HIST2H3PS2Q5TEC6 136 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR2T2Q6IF00 324 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 FAHD1Q6P587 224 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ERICH5Q6P6B1 374 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HIST2H3AQ71DI3 136 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SSX6Q7RTT6 188 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SLC35E3Q7Z769 313 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CYP4Z1Q86W10 505 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SBSPONQ8IVN8 264 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 IFT20Q8IY31 132 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 Q8N402 240 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 LINC00471Q8N535 108 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF565Q8N9K5 539 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SPANXA2-OT1Q8N9U9 137 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR1M1Q8NGA1 313 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR51L1Q8NGJ5 315 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ANGPTL6Q8NI99 470 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF420Q8TAQ5 688 aaPredicted RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 NDNFQ8TB73 568 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HAVCR2Q8TDQ0 301 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ORAOV1Q8WV07 137 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TMEM239Q8WW34 195 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 RBMXL1Q96E39 390 aaKnown RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CPNE2Q96FN4 548 aaPredicted RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CENPNQ96H22 339 aaPredicted RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 KCNS1Q96KK3 526 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF714Q96N38 554 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GPX7Q96SL4 187 aaPredicted RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 BCL7BQ9BQE9 202 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 UQCC2Q9BRT2 126 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF2Q9BSG1 426 aaPredicted RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 MRPL20Q9BYC9 149 aaKnown RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 C6orf62Q9GZU0 229 aaPredicted RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 RAB22AQ9UL26 194 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 NDUFAF1Q9Y375 327 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 LINC00312Q9Y6C7 94 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 V9GYY9 64 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 PLXNB1O43157 2135 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 PRR14LQ5THK1 2151 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HUWE1Q7Z6Z7 4374 aaKnown RBP1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ABCA13Q86UQ4 5058 aa1.54□□□□□ -2.16
RNU6-1140P-201ENST00000410517 PKHD1P08F94 4074 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TRGV10A0A0A0MS01 117 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TRAV8-6A0A0B4J262 113 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ARRDC5A6NEK1 342 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF98A6NK75 572 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SMIM23A6NLE4 172 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms