RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SMIM12Q96EX1 92 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 DCAF16Q9NXF7 216 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 A0A1W2PS18 150 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 CGB1A6NKQ9 187 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 FSTL3O95633 263 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 MORN5Q5VZ52 161 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 C10orf113Q5VZT2 155 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 PVRIGQ6DKI7 326 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 SSX8Q7RTT4 187 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 VN1R17PQ8TDU5 208 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 PAXXQ9BUH6 204 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
LIMS2-208ENST00000410011 FBXL7Q9UJT9 491 aa13.49□□□□□ -0.25
LIMS2-208ENST00000410011 E7EUB6 86 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 COX7A2P2O60397 106 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF253O75346 499 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 IGLV2-23P01705 113 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 MGST1P10620 155 aaKnown RBP13.48□□□□□ -0.25
LIMS2-208ENST00000410011 FOSL1P15407 271 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 WT1-ASQ06250 92 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF124Q15973 351 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF705AQ6ZN79 300 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF329Q86UD4 541 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 Q8N976 141 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 STXBP6Q8NFX7 210 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 FNDC4Q9H6D8 234 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF355PQ9NSJ1 428 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 IGKV1D-37A0A075B6S9 117 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 TRAV5A0A0B4J249 113 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 MYCNOSP40205 109 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 CCL8P80075 99 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 PATE2Q6UY27 113 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 GRAMD2BQ96HH9 432 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 NRN1Q9NPD7 142 aa13.48□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF331Q9NQX6 463 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-208ENST00000410011 TBL2Q9Y4P3 447 aaKnown RBP13.48□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF324O75467 553 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-208ENST00000410011 APCSP02743 223 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 ADIPOQQ15848 244 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 WASHC3Q9Y3C0 194 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 PPIAL4EA0A075B759 164 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 PPIAL4DF5H284 164 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 TMEM178BH3BS89 294 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 PEX7O00628 323 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 FCN3O75636 299 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 PPIAL4FP0DN26 164 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 CCL3L1P16619 93 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 MC5RP33032 325 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 C19orf35Q6ZS72 473 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 ASCL5Q7RTU5 278 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 ZCCHC24Q8N2G6 241 aaKnown RBP13.47□□□□□ -0.25
LIMS2-208ENST00000410011 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 SERTAD4Q9NUC0 356 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
LIMS2-208ENST00000410011 SPINK4O60575 86 aa13.46□□□□□ -0.25
LIMS2-208ENST00000410011 CRYGCP07315 174 aa13.46□□□□□ -0.25
LIMS2-208ENST00000410011 SRIP30626 198 aa13.46□□□□□ -0.25
LIMS2-208ENST00000410011 AMTP48728 403 aa13.46□□□□□ -0.25
LIMS2-208ENST00000410011 ETFRF1Q6IPR1 90 aa13.46□□□□□ -0.25
LIMS2-208ENST00000410011 RBMXL3Q8N7X1 1067 aaKnown RBP13.46□□□□□ -0.25
LIMS2-208ENST00000410011 OR10X1Q8NGY0 326 aa13.46□□□□□ -0.25
LIMS2-208ENST00000410011 NPIPB3Q92617 1050 aa13.46□□□□□ -0.25
LIMS2-208ENST00000410011 ATG101Q9BSB4 218 aa13.46□□□□□ -0.25
LIMS2-208ENST00000410011 YLPM1P49750 1951 aaKnown RBP13.46□□□□□ -0.25
LIMS2-208ENST00000410011 DIRC3C9JPN6 131 aa13.46□□□□□ -0.26
LIMS2-208ENST00000410011 CTRLP40313 264 aa13.46□□□□□ -0.26
LIMS2-208ENST00000410011 LGALS7P47929 136 aa13.46□□□□□ -0.26
LIMS2-208ENST00000410011 PRRX1P54821 245 aa13.46□□□□□ -0.26
LIMS2-208ENST00000410011 TCL1AP56279 114 aa13.46□□□□□ -0.26
LIMS2-208ENST00000410011 TBR1Q16650 682 aa13.46□□□□□ -0.26
LIMS2-208ENST00000410011 KLF12Q9Y4X4 402 aa13.46□□□□□ -0.26
LIMS2-208ENST00000410011 PRRC2CQ9Y520 2896 aaKnown RBP13.46□□□□□ -0.26
LIMS2-208ENST00000410011 C16orf97H3BN30 126 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 KIAA1644Q3SXP7 199 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 VMA21Q3ZAQ7 101 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 MRPL54Q6P161 138 aaKnown RBP13.45□□□□□ -0.26
LIMS2-208ENST00000410011 RCHY1Q96PM5 261 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 KAAG1Q9UBP8 84 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 PAM16Q9Y3D7 125 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 LOC400499M0QZD8 3231 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 NDUFB3O43676 98 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 SLC35B1P78383 322 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 SSBP2P81877 361 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-208ENST00000410011 PAX2Q02962 417 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 KLF5Q13887 457 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-208ENST00000410011 ATP5L2Q7Z4Y8 100 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 NUDT10Q8NFP7 164 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 FAM168AQ92567 244 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 NUDT11Q96G61 164 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 LINC00479Q96M42 142 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 C7orf69Q9H7B7 122 aa13.45□□□□□ -0.26
LIMS2-208ENST00000410011 DPRXA6NFQ7 191 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 OR2J3O76001 311 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 RPLP1P05386 114 aaKnown RBP13.44□□□□□ -0.26
LIMS2-208ENST00000410011 PYYP10082 97 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 HIST1H1EP10412 219 aaKnown RBP13.44□□□□□ -0.26
LIMS2-208ENST00000410011 DLX6P56179 175 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 KRTDAPP60985 99 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 LRRC10Q5BKY1 277 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 TSKUQ8WUA8 353 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms