RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 OR5A1Q8NGJ0 315 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 ZNF775Q96BV0 537 aaPredicted RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 RPP25Q9BUL9 199 aaKnown RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 SRD5A3Q9H8P0 318 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 VPREB3Q9UKI3 123 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 WDFY3Q8IZQ1 3526 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 IER3P46695 156 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 Q5PR19 223 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 C8orf31Q8N9H6 132 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 CHCHD1Q96BP2 118 aaKnown RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 WNT5BQ9H1J7 359 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 FGF16O43320 207 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 HYAL3O43820 417 aaPredicted RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 MFAP2P55001 183 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 DRAM1Q8N682 238 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 DERL1Q9BUN8 251 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 MBD3L4A6NDZ8 208 aaPredicted RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 MBD3L3A6NE82 208 aaPredicted RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 MBD3L5A6NJ08 208 aaPredicted RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 PRR32B1ATL7 298 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 M0R2P5 195 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 CCL25O15444 150 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 ZG16O60844 167 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 IGHV3-13P01766 116 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 PSG2P11465 335 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 FHITP49789 147 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 CLDN12P56749 244 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 FAM74A4Q5TZK3 123 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 COLCA1Q6ZS62 124 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 RFLNBQ8N5W9 214 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 TMEM252Q8N6L7 170 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 MBD3L2Q8NHZ7 208 aaPredicted RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 COL4A5P29400 1685 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 LAMA2P24043 3122 aaKnown RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 CENPFP49454 3210 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 TRAV14DV4A0A0A6YYC5 116 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 TCRBV5S2A0A599 114 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 UBE2CO00762 179 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 IGKV3-11P04433 115 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 ASCL4Q6XD76 172 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 C5orf24Q7Z6I8 188 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 SLC25A45Q8N413 288 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 ST20Q9HBF5 79 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 K7ENP7 123 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 CDAP32320 146 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 CXCL5P42830 114 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 ERCC8Q13216 396 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 RBMY1FQ15415 496 aaKnown RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 MPV17L2Q567V2 206 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 PRNTQ86SH4 94 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 SLC22A18ASQ8N1D0 253 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 DYRK2Q92630 601 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 Q96M66 194 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 SCGB3A1Q96QR1 104 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 PRSS27Q9BQR3 290 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 FAM103A1Q9BTL3 118 aaKnown RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 OTORQ9NRC9 128 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 LENEPQ9Y5L5 61 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 CEP350Q5VT06 3117 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 A0A0A6YYD4 124 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 TMEM89A2RUT3 159 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 ALKBH6Q3KRA9 238 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 ZNF660Q6AZW8 331 aaPredicted RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 LINC00305Q7Z4B0 112 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 TRAV40A0A0B4J280 105 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 HMX2A2RU54 273 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 WNT3P56703 355 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 SUPT4H1P63272 117 aaKnown RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 MRGPRFQ96AM1 343 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 SPSB2Q99619 263 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 LINC00474Q9P2X8 69 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 PTPN13Q12923 2485 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 H3BVH4 76 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 SMIM13P0DJ93 91 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 UBE2E1P51965 193 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 VMO1Q7Z5L0 202 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 MBD3L1Q8WWY6 194 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 FAM53CQ9NYF3 392 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 KCNE3Q9Y6H6 103 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 SMAD7O15105 426 aaKnown RBP2.28□□□□□ -2.04
CHD9-202ENST00000398510 PRTN3P24158 256 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CRYBB2P43320 205 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 GAS1P54826 345 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 TIAL1Q01085 375 aaKnown RBP eCLIP2.28□□□□□ -2.043e-8■■■■■ 28.9
CHD9-202ENST00000398510 PNKDQ8N490 385 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 LINC00479Q96M42 142 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 RTN4RQ9BZR6 473 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 UQCR10Q9UDW1 63 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 IGHV2-70P01814 119 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CDKN1AP38936 164 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 RAE1P78406 368 aaKnown RBP2.28□□□□□ -2.04
CHD9-202ENST00000398510 ZNF683Q8IZ20 524 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 LINC00518Q8N0U6 118 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 GNB1LQ9BYB4 327 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 JPT2Q9H910 190 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 TMEM242Q9NWH2 141 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 SLC25A15Q9Y619 301 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 C7orf71A4D174 169 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CD74P04233 296 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 WNT5AP41221 380 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms