RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 PRR20BP86481 221 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 PRR20AP86496 221 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 UBE2V1Q13404 147 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 TNXAQ16473 311 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 IL19Q9UHD0 177 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 SH2D7A6NKC9 451 aaPredicted RBP11.22□□□□□ -0.61
COL6A2-203ENST00000397763 CORTO00230 105 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 REG1AP05451 166 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 CD59P13987 128 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 MFAP2P55001 183 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 KLF3P57682 345 aaPredicted RBP11.22□□□□□ -0.61
COL6A2-203ENST00000397763 CX3CL1P78423 397 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 RPL19P84098 196 aaKnown RBP11.22□□□□□ -0.61
COL6A2-203ENST00000397763 C19orf35Q6ZS72 473 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 DDB2Q92466 427 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 MCRIP2Q9BUT9 160 aaKnown RBP11.22□□□□□ -0.61
COL6A2-203ENST00000397763 COX11Q9Y6N1 276 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 RELNP78509 3460 aa11.22□□□□□ -0.61
COL6A2-203ENST00000397763 NBASA2RRP1 2371 aa11.21□□□□□ -0.61
COL6A2-203ENST00000397763 FBLN7Q53RD9 439 aa11.21□□□□□ -0.61
COL6A2-203ENST00000397763 LOXL4Q96JB6 756 aa11.21□□□□□ -0.61
COL6A2-203ENST00000397763 TOX4O94842 621 aa11.21□□□□□ -0.62
COL6A2-203ENST00000397763 TMPRSS3P57727 454 aa11.21□□□□□ -0.62
COL6A2-203ENST00000397763 WDR73Q6P4I2 378 aa11.21□□□□□ -0.62
COL6A2-203ENST00000397763 TRAT1Q6PIZ9 186 aa11.21□□□□□ -0.62
COL6A2-203ENST00000397763 ORAOV1Q8WV07 137 aa11.21□□□□□ -0.62
COL6A2-203ENST00000397763 TMEM14BQ9NUH8 114 aa11.21□□□□□ -0.62
COL6A2-203ENST00000397763 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.62
COL6A2-203ENST00000397763 LOC105371242A0A075B767 164 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 J3QW42 95 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 TMEM11P17152 192 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 UBE2L3P68036 154 aaKnown RBP11.2□□□□□ -0.62
COL6A2-203ENST00000397763 BLNKQ8WV28 456 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 ZC2HC1AQ96GY0 325 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 COL27A1Q8IZC6 1860 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-203ENST00000397763 LRBAP50851 2863 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 IGLV2-8P01709 118 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 IGLL1P15814 213 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 DIAPH2-AS1Q14236 149 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 TMEM249Q2WGJ8 235 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 C22orf34Q6ZV56 151 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 KIR3DL3Q8N743 410 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 OR52E5Q8NH55 327 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 WASHC3Q9Y3C0 194 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 ACACAQ13085 2346 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-203ENST00000397763 AMY1AP04745 511 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 AREGP15514 252 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 DLX1P56177 255 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 AARDQ4LEZ3 155 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 SAPCD1Q5SSQ6 148 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
COL6A2-203ENST00000397763 TECRQ9NZ01 308 aaKnown RBP11.2□□□□□ -0.62
COL6A2-203ENST00000397763 TEX50A0A1B0GTY4 177 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 C9JCJ5 164 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 FOXA3P55318 350 aaPredicted RBP11.19□□□□□ -0.62
COL6A2-203ENST00000397763 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 ASCL2Q99929 193 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 COLQQ9Y215 455 aaPredicted RBP11.19□□□□□ -0.62
COL6A2-203ENST00000397763 AKAP13Q12802 2813 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 MT-ND6P03923 174 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 PPP1R35Q8TAP8 253 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 ZNF596Q8TC21 504 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 NEUROG1Q92886 237 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 OR8B2Q96RD0 313 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 GAL3ST2Q9H3Q3 398 aa11.19□□□□□ -0.62
COL6A2-203ENST00000397763 SAA1P0DJI8 122 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-203ENST00000397763 CT45A6P0DMU7 189 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 CT45A5P0DMU8 189 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 CT45A7P0DMV0 189 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 TNFSF4P23510 183 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 CCL8P80075 99 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 MPV17L2Q567V2 206 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 OR10J3Q5JRS4 329 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 RUSC1-AS1Q66K80 236 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 EBLN2Q6P2I7 272 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 C18orf32Q8TCD1 76 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 TRBV9A0A0B4J1U6 114 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 F2RL2O00254 374 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 CCL3L1P16619 93 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 BHLHA15Q7RTS1 189 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-203ENST00000397763 FOXA2Q9Y261 457 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-203ENST00000397763 MED13LQ71F56 2210 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 KBTBD11-OT1A0A1B0GTJ5 212 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 ZNF891A8MT65 544 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-203ENST00000397763 ISLRO14498 428 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 HLA-DQA1P01909 254 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 OR2D3Q8NGH3 330 aa11.18□□□□□ -0.62
COL6A2-203ENST00000397763 MRPL36Q9P0J6 103 aaKnown RBP11.18□□□□□ -0.62
COL6A2-203ENST00000397763 TRAV9-1A0A075B6T8 112 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 IGHV3-72A0A0B4J1Y9 119 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 TRGV8A0A0C4DH27 118 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 CA7P43166 264 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 NPIPB3Q92617 1050 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 PMCHL2Q9BQD1 86 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 ZNF71Q9NQZ8 489 aaPredicted RBP11.17□□□□□ -0.62
COL6A2-203ENST00000397763 ANKRD11Q6UB99 2663 aaPredicted RBP11.17□□□□□ -0.62
COL6A2-203ENST00000397763 hDV102S1A0JD36 115 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms