RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 IGKV1D-33P01593 117 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 IGKV1-33P01594 117 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 MBP02144 154 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 BSXQ3C1V8 233 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 TEX45Q8NA69 505 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 FNDC10F2Z333 226 aa13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 DNASE2O00115 360 aaPredicted RBP13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 CA2P00918 260 aa13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 PPT1P50897 306 aa13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 ELLP55199 621 aaPredicted RBP13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 ZNF506Q5JVG8 444 aa13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 SSX7Q7RTT5 188 aa13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 SSX3Q99909 188 aa13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 SIGLEC9Q9Y336 463 aa13.81□□□□□ -0.2
TNFSF13-205ENST00000396545 SNAPINO95295 136 aa13.8□□□□□ -0.2
TNFSF13-205ENST00000396545 RPL8P62917 257 aaKnown RBP13.8□□□□□ -0.2
TNFSF13-205ENST00000396545 PMS2P11Q13670 270 aa13.8□□□□□ -0.2
TNFSF13-205ENST00000396545 RPP25LQ8N5L8 163 aaKnown RBP13.8□□□□□ -0.2
TNFSF13-205ENST00000396545 RARRES2Q99969 163 aa13.8□□□□□ -0.2
TNFSF13-205ENST00000396545 SLC35B3Q9H1N7 401 aa13.8□□□□□ -0.2
TNFSF13-205ENST00000396545 MEGF9Q9H1U4 602 aa13.8□□□□□ -0.2
TNFSF13-205ENST00000396545 NDUFA4L2Q9NRX3 87 aa13.8□□□□□ -0.2
TNFSF13-205ENST00000396545 IFNA4P05014 189 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 C2orf83Q53S99 150 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 FFAR4Q5NUL3 377 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 LDLRAD2Q5SZI1 272 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 ZNF709Q8N972 641 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 OR1L8Q8NGR8 309 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 CFHR4Q92496 578 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 NOTCH3Q9UM47 2321 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 HSPB1P04792 205 aaKnown RBP13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 MAS1LP35410 378 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 ICAM4Q14773 271 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 LY6EQ16553 131 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 MRGPRG-AS1Q2M3A8 158 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 KHDC3LQ587J8 217 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 LHFPL4Q7Z7J7 247 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 HINT2Q9BX68 163 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 LSM4Q9Y4Z0 139 aaKnown RBP13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 HILPDAQ9Y5L2 63 aa13.79□□□□□ -0.2
TNFSF13-205ENST00000396545 IGHV3-72A0A0B4J1Y9 119 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 CTXND1A0A1B0GTU2 59 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 LOC102723971A0A1B0GUV8 181 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 MAP1LC3B2A6NCE7 125 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 CGB1A6NKQ9 187 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 OPN1MWP04001 364 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 CRYGBP07316 175 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 OPN1MW2P0DN77 364 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 OPN1MW3P0DN78 364 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 RNASE2P10153 161 aaKnown RBP13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 PAX6P26367 422 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 BRS3P32247 399 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 OPRK1P41145 380 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 NPBWR1P48145 328 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 EBI3Q14213 229 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 SSX2Q16385 188 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 ARSJQ5FYB0 599 aaPredicted RBP13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 LCN15Q6UWW0 184 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 MMD2Q8IY49 270 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 OR10G4Q8NGN3 311 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 OR10G9Q8NGN4 311 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 OR10G7Q8NGN6 311 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 OR2T10Q8NGZ9 312 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 COMMD5Q9GZQ3 224 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 MAP1LC3BQ9GZQ8 125 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 NPVFQ9HCQ7 196 aa13.78□□□□□ -0.2
TNFSF13-205ENST00000396545 A0A1W2PN81 502 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 MOSP00540 346 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 SRP19P09132 144 aaKnown RBP13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 CHRNA7P36544 502 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 HAGHQ16775 308 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 BEAN1Q3B7T3 259 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 ACOT6Q3I5F7 207 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 KLHDC1Q8N7A1 406 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 CLRN3Q8NCR9 226 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 RITA1Q96K30 269 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 MGST2Q99735 147 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 GGTLC1Q9BX51 225 aa13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 ZNF430Q9H8G1 570 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13-205ENST00000396545 FAM74A7A6NL05 159 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 G3V4G9 280 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 HNF4GQ14541 408 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 FAM74A3Q4VXF1 159 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 KPRPQ5T749 579 aaPredicted RBP13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 MRPL41Q8IXM3 137 aaKnown RBP13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 OR2T6Q8NHC8 308 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 PIFOQ8TCI5 191 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 ACTR3CQ9C0K3 210 aaPredicted RBP13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 SLC39A9Q9NUM3 307 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 TMA7Q9Y2S6 64 aaKnown RBP13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 PLXNB1O43157 2135 aa13.76□□□□□ -0.21
TNFSF13-205ENST00000396545 SMCO3A2RU48 225 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 SEC14L6B5MCN3 397 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 SLC25A17O43808 307 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 PSG5Q15238 335 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 C11orf44Q8N8P7 122 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 NPBQ8NG41 125 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 NPFFR1Q9GZQ6 430 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms