RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PDCD11Q14690 1871 aaKnown RBP16.44■□□□□ 0.22
SHANK1-203ENST00000391813 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-203ENST00000391813 ITGB1BP1O14713 200 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 REG1AP05451 166 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 GFRA1P56159 465 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 FAM90A1Q86YD7 464 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 TSPAN13O95857 204 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 WDR82Q6UXN9 313 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 ZNF479Q96JC4 524 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 MESP1Q9BRJ9 268 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 Q9H3A6 140 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 POLR3KQ9Y2Y1 108 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-203ENST00000391813 CRXO43186 299 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-203ENST00000391813 YPEL1O60688 119 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 MPV17L2Q567V2 206 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 FER1L6-AS1Q8NA97 138 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 YPEL2Q96QA6 119 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 GGTLC1Q9BX51 225 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 ESPL1Q14674 2120 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 IGKV3-7A0A075B6H7 116 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 CD5LO43866 347 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 SCGB3A1Q96QR1 104 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 ANAPC13Q9BS18 74 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 NXT2Q9NPJ8 142 aaKnown RBP16.43■□□□□ 0.22
SHANK1-203ENST00000391813 DEPPQ9NTK1 212 aa16.43■□□□□ 0.22
SHANK1-203ENST00000391813 ERVK11-1P61568 191 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 Q0VG73 95 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 TPTE2P1Q5T6R2 138 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 TREML4Q6UXN2 200 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 FLVCR1-AS1Q8TAF5 88 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 FAM57AQ8TBR7 257 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 SIGLEC12Q96PQ1 595 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 TRAV24A0A0B4J272 114 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 GATA2P23769 480 aaPredicted RBP16.42■□□□□ 0.22
SHANK1-203ENST00000391813 GCSAMLQ5JQS6 135 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 ZNF837Q96EG3 531 aaPredicted RBP16.42■□□□□ 0.22
SHANK1-203ENST00000391813 SLC25A2Q9BXI2 301 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 IGKV1-12A0A0C4DH73 117 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 A0A0G2JLM5 398 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 IGKV1D-12P01611 117 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 DPM2O94777 84 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 ZNRF1Q8ND25 227 aa16.42■□□□□ 0.22
SHANK1-203ENST00000391813 SS18L1O75177 396 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-203ENST00000391813 TMEM170BQ5T4T1 132 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 TTC28Q96AY4 2481 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 GAGE12BA1L429 117 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 APOMO95445 188 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 CRYGSP22914 178 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 CACNG7P62955 275 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 GAGE13Q4V321 117 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 IFI27L1Q96BM0 104 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 KBTBD11-OT1A0A1B0GTJ5 212 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 CYSLTR1Q9Y271 337 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 UPK2O00526 184 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 RAMP3O60896 148 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 PEAR1Q5VY43 1037 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-203ENST00000391813 BEX4Q9NWD9 120 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-203ENST00000391813 SMPXQ9UHP9 88 aa16.41■□□□□ 0.22
SHANK1-203ENST00000391813 FNDC1Q4ZHG4 1894 aaPredicted RBP16.4■□□□□ 0.22
SHANK1-203ENST00000391813 Q6ZT83 130 aa16.4■□□□□ 0.22
SHANK1-203ENST00000391813 SHISA5Q8N114 240 aa16.4■□□□□ 0.22
SHANK1-203ENST00000391813 CD69Q07108 199 aa16.4■□□□□ 0.22
SHANK1-203ENST00000391813 OR5AN1Q8NGI8 311 aa16.4■□□□□ 0.22
SHANK1-203ENST00000391813 NPIPB11E5RHQ5 1161 aa16.4■□□□□ 0.22
SHANK1-203ENST00000391813 THADAQ6YHU6 1953 aa16.4■□□□□ 0.22
SHANK1-203ENST00000391813 MTCL1Q9Y4B5 1905 aaKnown RBP16.39■□□□□ 0.22
SHANK1-203ENST00000391813 ZNF585BQ52M93 769 aa16.39■□□□□ 0.21
SHANK1-203ENST00000391813 TRAV8-2A0A0B4J237 113 aa16.39■□□□□ 0.21
SHANK1-203ENST00000391813 ESDP10768 282 aa16.39■□□□□ 0.21
SHANK1-203ENST00000391813 PRSS8Q16651 343 aa16.39■□□□□ 0.21
SHANK1-203ENST00000391813 Q6ZS49 121 aa16.39■□□□□ 0.21
SHANK1-203ENST00000391813 NCOR1P1Q9H4R4 102 aa16.39■□□□□ 0.21
SHANK1-203ENST00000391813 RFNGQ9Y644 331 aa16.39■□□□□ 0.21
SHANK1-203ENST00000391813 FOXI3A8MTJ6 420 aaPredicted RBP16.39■□□□□ 0.21
SHANK1-203ENST00000391813 HGFACQ04756 655 aa16.39■□□□□ 0.21
SHANK1-203ENST00000391813 SLC25A48Q6ZT89 311 aaKnown RBP16.38■□□□□ 0.21
SHANK1-203ENST00000391813 FAM106CPP0CH98 169 aa16.38■□□□□ 0.21
SHANK1-203ENST00000391813 LOXL3P58215 753 aa16.38■□□□□ 0.21
SHANK1-203ENST00000391813 DMRTA2Q96SC8 542 aa16.38■□□□□ 0.21
SHANK1-203ENST00000391813 LCN12Q6JVE5 192 aa16.38■□□□□ 0.21
SHANK1-203ENST00000391813 COQ2Q96H96 371 aa16.38■□□□□ 0.21
SHANK1-203ENST00000391813 IQCF6A8MYZ5 107 aa16.38■□□□□ 0.21
SHANK1-203ENST00000391813 LEPP41159 167 aa16.38■□□□□ 0.21
SHANK1-203ENST00000391813 C19orf54Q5BKX5 351 aa16.38■□□□□ 0.21
SHANK1-203ENST00000391813 DUTP33316 252 aaKnown RBP16.37■□□□□ 0.21
SHANK1-203ENST00000391813 CD33P20138 364 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 EBLN2Q6P2I7 272 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 C1orf162Q8NEQ5 155 aaPredicted RBP16.37■□□□□ 0.21
SHANK1-203ENST00000391813 CLEC7AQ9BXN2 247 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 GREB1Q4ZG55 1949 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 SDK2Q58EX2 2172 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 TCRBV4S1A1TA0A5B7 111 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 TMEM8BA6NDV4 472 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 CGB1A6NKQ9 187 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 IGKV1-5P01602 117 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 PRCDQ00LT1 54 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 HOXA3O43365 443 aaPredicted RBP16.37■□□□□ 0.21
SHANK1-203ENST00000391813 HTN1P15515 57 aa16.37■□□□□ 0.21
SHANK1-203ENST00000391813 DNAL4O96015 105 aa16.36■□□□□ 0.21
SHANK1-203ENST00000391813 GLRXP35754 106 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms