RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 SMIM7Q9BQ49 75 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 SRSF8Q9BRL6 282 aaKnown RBP13.4□□□□□ -0.26
HLA-A-202ENST00000376806 CENPEQ02224 2701 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 IGKV1D-37A0A075B6S9 117 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 A0A087WWC5 75 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 CORTO00230 105 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 MT-CO2P00403 227 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 IGHV3-48P01763 117 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 OR5G3P0C626 314 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 UBE2E1P51965 193 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 RND2P52198 227 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 ISOC2Q96AB3 205 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 RPUSD4Q96CM3 377 aaKnown RBP13.39□□□□□ -0.27
HLA-A-202ENST00000376806 PSMG3-AS1Q96PY0 264 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 SDF2L1Q9HCN8 221 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 CELSR2Q9HCU4 2923 aa13.39□□□□□ -0.27
HLA-A-202ENST00000376806 TCRBV4S1A1TA0A5B7 111 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 ATP5G3P48201 142 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 ZNF674Q2M3X9 581 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 C10orf105Q8TEF2 133 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 C19orf24Q9BVV8 132 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 PARLQ9H300 379 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 POLR3KQ9Y2Y1 108 aaPredicted RBP13.38□□□□□ -0.27
HLA-A-202ENST00000376806 CNIH1O95406 144 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 C5orf64Q2M2E5 130 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 HIST2H2BCQ6DN03 193 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 Q8N6K4 173 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 HIST1H2BAQ96A08 127 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 NAT8Q9UHE5 227 aa13.38□□□□□ -0.27
HLA-A-202ENST00000376806 PSMB11A5LHX3 300 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 VWC2LB2RUY7 222 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 B4DEV8 164 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 NDUFS8O00217 210 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 PDE6DO43924 150 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 ATP5J2P56134 94 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 EBI3Q14213 229 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 CST9LP1Q5W188 147 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 C22orf15Q8WYQ4 148 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 TXNDC17Q9BRA2 123 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 SLC25A33Q9BSK2 321 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 MRPL32Q9BYC8 188 aaKnown RBP13.37□□□□□ -0.27
HLA-A-202ENST00000376806 LPAR2Q9HBW0 351 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 DMRT1Q9Y5R6 373 aa13.37□□□□□ -0.27
HLA-A-202ENST00000376806 IGHV4-61A0A0C4DH41 118 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 F6UZH7 168 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 OR2C1O95371 312 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 CLEC2AQ6UVW9 174 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 TECRQ9NZ01 308 aaKnown RBP13.36□□□□□ -0.27
HLA-A-202ENST00000376806 FBN2P35556 2912 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 SELENOTP62341 195 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 ZNF90Q03938 601 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 KIAA0141Q14154 515 aaPredicted RBP13.36□□□□□ -0.27
HLA-A-202ENST00000376806 TMEM37Q8WXS4 190 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 MALSU1Q96EH3 234 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 AJUBAQ96IF1 538 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 RNF2Q99496 336 aa13.36□□□□□ -0.27
HLA-A-202ENST00000376806 YTHDF2Q9Y5A9 579 aaKnown RBP13.36□□□□□ -0.27
HLA-A-202ENST00000376806 PTPN13Q12923 2485 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 CLN5O75503 358 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 NPPCP23582 126 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 SAA4P35542 130 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 TAS2R45P59539 299 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 FXYD3Q14802 87 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 NBPF19A0A087WUL8 3843 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 MED13LQ71F56 2210 aa13.35□□□□□ -0.27
HLA-A-202ENST00000376806 MT-ND4LP03901 98 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 COX6B1P14854 86 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 TMEM11P17152 192 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 CTRB1P17538 263 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 BPIFB3P59826 476 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 TMEM241Q24JQ0 296 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 CTRB2Q6GPI1 263 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 PQLC2Q6ZP29 291 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 OR51G1Q8NGK1 321 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 OR1L4Q8NGR5 311 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 ZNF503Q96F45 646 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 YPEL4Q96NS1 127 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 PFDN5Q99471 154 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 TRGV9Q99603 122 aa13.34□□□□□ -0.27
HLA-A-202ENST00000376806 IGHV3-21A0A0B4J1V1 117 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 COX7A2P2O60397 106 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 CRYBA1P05813 215 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 FOLR2P14207 255 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 ADIRFQ15847 76 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 FAM24BQ8N5W8 94 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 WNT10AQ9GZT5 417 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 DNAJC4Q9NNZ3 241 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 TMEM167BQ9NRX6 74 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 TNFRSF19Q9NS68 423 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 ARL2-SNX15V9GYD0 113 aa13.33□□□□□ -0.27
HLA-A-202ENST00000376806 NCBP2LA6PVI3 153 aaKnown RBP13.33□□□□□ -0.28
HLA-A-202ENST00000376806 I3L2K1 104 aa13.33□□□□□ -0.28
HLA-A-202ENST00000376806 NPFFO15130 113 aa13.33□□□□□ -0.28
HLA-A-202ENST00000376806 TSPAN9O75954 239 aa13.33□□□□□ -0.28
HLA-A-202ENST00000376806 C8orf88P0DMB2 117 aa13.33□□□□□ -0.28
HLA-A-202ENST00000376806 OR4X1Q8NH49 305 aa13.33□□□□□ -0.28
HLA-A-202ENST00000376806 FAM103A1Q9BTL3 118 aaKnown RBP13.33□□□□□ -0.28
HLA-A-202ENST00000376806 DOK5Q9P104 306 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms