RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PPP5D1E7EU14 171 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 FNDC10F2Z333 226 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 FCN1O00602 326 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 S100A8P05109 93 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 ASPHD1Q5U4P2 390 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 ANAPC16Q96DE5 110 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 CFAP46Q8IYW2 2715 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 IGLC7A0M8Q6 106 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 K7EN84 100 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 MT-CO2P00403 227 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 PYYP10082 97 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 CDKN1AP38936 164 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 OR5I1Q13606 314 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 OR2T10Q8NGZ9 312 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 RAB1BQ9H0U4 201 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 TECRQ9NZ01 308 aaKnown RBP12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 IGKV1D-37A0A075B6S9 117 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 SLC17A3O00476 420 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 CDX1P47902 265 aaPredicted RBP12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 SFRP2Q96HF1 295 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 SLC25A33Q9BSK2 321 aa12.82□□□□□ -0.36
CNKSR1-202ENST00000374253 GGTLC3B5MD39 225 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 RPL27AP46776 148 aaKnown RBP12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 LGALS7P47929 136 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 SUMO1P63165 101 aaKnown RBP12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 SRD5A3Q9H8P0 318 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 SIGLEC9Q9Y336 463 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 MDFIC2A0A1B0GVS7 189 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 PPP1R2P9O14990 202 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 OR5G3P0C626 314 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 UQCRFS1P47985 274 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 OR5AU1Q8NGC0 362 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 CACNG8Q8WXS5 425 aa12.81□□□□□ -0.36
CNKSR1-202ENST00000374253 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 SMIM6P0DI80 62 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 GPX4P36969 197 aaPredicted RBP12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 SUB1P53999 127 aaKnown RBP eCLIP12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 PLGLAQ15195 96 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 FBLN7Q53RD9 439 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 PATE2Q6UY27 113 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 SGMS2Q8NHU3 365 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 SLC25A2Q9BXI2 301 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 CBLN4Q9NTU7 201 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 TIMM23O14925 209 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 ORM2P19652 201 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 OR10D4PQ8NGN7 298 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 DNAJC4Q9NNZ3 241 aa12.8□□□□□ -0.36
CNKSR1-202ENST00000374253 ZNF320A2RRD8 509 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 PSMB11A5LHX3 300 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 LIPFP07098 398 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 C8orf88P0DMB2 117 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 FABP4P15090 132 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 ATP5IP56385 69 aaPredicted RBP12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 UBE2L3P68036 154 aaKnown RBP12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 PPP1R27Q86WC6 154 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 MMD2Q8IY49 270 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 HIST3H2BBQ8N257 126 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 LINC00479Q96M42 142 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 TEX38Q6PEX7 206 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 NHLRC2Q8NBF2 726 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 RNASEH2CQ8TDP1 164 aaKnown RBP12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 FAM167A-AS1Q96KT0 104 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 GAR1Q9NY12 217 aaKnown RBP12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 MIOXQ9UGB7 285 aa12.79□□□□□ -0.36
CNKSR1-202ENST00000374253 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 S100A2P29034 98 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 CENPWQ5EE01 88 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 PQLC2Q6ZP29 291 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 TEX45Q8NA69 505 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 TXNDC17Q9BRA2 123 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 FAM103A1Q9BTL3 118 aaKnown RBP12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 TCRBV4S1A1TA0A5B7 111 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 INS-IGF2F8WCM5 200 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 GGCTO75223 188 aaKnown RBP12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 CRYGBP07316 175 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 COMPP49747 757 aaPredicted RBP12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 TAS2R45P59539 299 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 C10orf113Q5VZT2 155 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 C11orf71Q6IPW1 123 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 KCNIP4Q6PIL6 250 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 BEND2Q8NDZ0 799 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 OR1B1Q8NGR6 318 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 TNFRSF14Q92956 283 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 TIMD4Q96H15 378 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 SPOCK3Q9BQ16 436 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 DMRT1Q9Y5R6 373 aa12.78□□□□□ -0.36
CNKSR1-202ENST00000374253 FLNCQ14315 2725 aa12.77□□□□□ -0.36
CNKSR1-202ENST00000374253 HELTA6NFD8 242 aa12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 H3BTX0 84 aa12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 SRP14P37108 136 aaKnown RBP12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 MMDQ15546 238 aa12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 PYY3Q5JQD4 70 aa12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 OR10G8Q8NGN5 311 aa12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 EAF1Q96JC9 268 aaPredicted RBP12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 TNFRSF19Q9NS68 423 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms