RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 NUDT10Q8NFP7 164 aa18.42■□□□□ 0.54
TM9SF3-201ENST00000371142 SLC50A1Q9BRV3 221 aa18.42■□□□□ 0.54
TM9SF3-201ENST00000371142 PLXNA1Q9UIW2 1896 aa18.42■□□□□ 0.54
TM9SF3-201ENST00000371142 EVI2AP22794 236 aa18.42■□□□□ 0.54
TM9SF3-201ENST00000371142 KIR3DL3Q8N743 410 aa18.42■□□□□ 0.54
TM9SF3-201ENST00000371142 ASCL2Q99929 193 aa18.42■□□□□ 0.54
TM9SF3-201ENST00000371142 PATJQ8NI35 1801 aa18.42■□□□□ 0.54
TM9SF3-201ENST00000371142 SNRNP200O75643 2136 aaKnown RBP18.42■□□□□ 0.54
TM9SF3-201ENST00000371142 VCX2Q9H322 139 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 CCL20P78556 96 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 SBF2Q86WG5 1849 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 TRAV9-1A0A075B6T8 112 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 LINC00614P0C842 121 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 SFTA2Q6UW10 78 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 PGPEP1LA6NFU8 196 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 LYPD3O95274 346 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 NSUN5P1Q3KNT7 163 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 TMEM95Q3KNT9 176 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 SPCS1Q9Y6A9 102 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 CD33P20138 364 aa18.41■□□□□ 0.54
TM9SF3-201ENST00000371142 NRN1Q9NPD7 142 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 ZNF257Q9Y2Q1 563 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 FOXF2Q12947 444 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 OR10W1Q8NGF6 305 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 ARID2Q68CP9 1835 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 TRAV40A0A0B4J280 105 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 CCL1P22362 96 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 TRAV12-3A0A0B4J271 114 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 IFI27P40305 119 aaPredicted RBP18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 ZNF362Q5T0B9 420 aaPredicted RBP18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 DMRTA1Q5VZB9 504 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 JMJD8Q96S16 334 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 IGKV1D-8A0A087WSZ0 117 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 IGHV1-46P01743 117 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 C3orf36Q3SXR2 165 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 PSG8Q9UQ74 426 aa18.4■□□□□ 0.54
TM9SF3-201ENST00000371142 ZNF585BQ52M93 769 aa18.39■□□□□ 0.53
TM9SF3-201ENST00000371142 SCN10AQ9Y5Y9 1956 aa18.39■□□□□ 0.53
TM9SF3-201ENST00000371142 IGHV4-39P01824 125 aa18.39■□□□□ 0.53
TM9SF3-201ENST00000371142 DUTP33316 252 aaKnown RBP18.39■□□□□ 0.53
TM9SF3-201ENST00000371142 WFDC1Q9HC57 220 aa18.39■□□□□ 0.53
TM9SF3-201ENST00000371142 COQ2Q96H96 371 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 SAMD13Q5VXD3 122 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 C1QL4Q86Z23 238 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 TRAV21A0A0B4J279 112 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 PRCDQ00LT1 54 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 LY6G6FQ5SQ64 297 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 PAQR4Q8N4S7 273 aaPredicted RBP18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 VKORC1Q9BQB6 163 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 C19orf67A6NJJ6 358 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 GSN-AS1Q9NRJ2 163 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 HEATR5BQ9P2D3 2071 aa18.38■□□□□ 0.53
TM9SF3-201ENST00000371142 TRAV5A0A0B4J249 113 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 PRDM13Q9H4Q3 707 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 VSIRQ9H7M9 311 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 EFNB3Q15768 340 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 PSME4Q14997 1843 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 IGLV3-32A0A0A0MS00 114 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 CA1P00915 261 aaPredicted RBP18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 ZFP36L1Q07352 338 aaKnown RBP18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 NIT1Q86X76 327 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 SPACA3Q8IXA5 215 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 DOCK3Q8IZD9 2030 aa18.37■□□□□ 0.53
TM9SF3-201ENST00000371142 TRGV4A0A0C4DH28 118 aa18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 FOXG1P55316 489 aaPredicted RBP18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 BRCA1P38398 1863 aaKnown RBP18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 H0YIZ8 118 aa18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 MLNRO43193 412 aa18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 SRSF1Q07955 248 aaKnown RBP eCLIP18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 TMEM170AQ8WVE7 144 aa18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 H3BUT2 72 aa18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 DUSP14O95147 198 aaKnown RBP18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 NAPSAO96009 420 aa18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 OR5A1Q8NGJ0 315 aa18.36■□□□□ 0.53
TM9SF3-201ENST00000371142 CACNA1IQ9P0X4 2223 aa18.35■□□□□ 0.53
TM9SF3-201ENST00000371142 OCC1Q8TAD7 63 aa18.35■□□□□ 0.53
TM9SF3-201ENST00000371142 GFI1Q99684 422 aa18.35■□□□□ 0.53
TM9SF3-201ENST00000371142 PAX8Q06710 450 aa18.35■□□□□ 0.53
TM9SF3-201ENST00000371142 PCP4P48539 62 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 WNT2P09544 360 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 FAM89BQ8N5H3 189 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 SELLP14151 372 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 FAM169BQ8N8A8 192 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 METRNQ9UJH8 293 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 CD28P10747 220 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 SIGLEC15Q6ZMC9 328 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 SEPSECSQ9HD40 501 aaKnown RBP18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 NHP2Q9NX24 153 aaKnown RBP18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 IGHV3-64A0A075B6Q5 118 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 IGKV1-12A0A0C4DH73 117 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 IGKV1D-12P01611 117 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 PSMG4Q5JS54 123 aa18.34■□□□□ 0.53
TM9SF3-201ENST00000371142 J3QRE1 110 aa18.33■□□□□ 0.53
TM9SF3-201ENST00000371142 CFHR1Q03591 330 aa18.33■□□□□ 0.53
TM9SF3-201ENST00000371142 TMEM219Q86XT9 240 aa18.33■□□□□ 0.53
TM9SF3-201ENST00000371142 TRAV2A0A0B4J234 112 aa18.33■□□□□ 0.53
TM9SF3-201ENST00000371142 E9PLN8 166 aa18.33■□□□□ 0.53
TM9SF3-201ENST00000371142 HBDP02042 147 aa18.33■□□□□ 0.53
TM9SF3-201ENST00000371142 C8orf46Q8TAG6 207 aa18.33■□□□□ 0.53
TM9SF3-201ENST00000371142 BRWD3Q6RI45 1802 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms