RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 MBD6Q96DN6 1003 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 S1PR3Q99500 378 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 CDX2Q99626 313 aaPredicted RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 SCRT2Q9NQ03 307 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 TNFRSF19Q9NS68 423 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 HCFC1P51610 2035 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 PRSS46E5RG02 174 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 HAND1O96004 215 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 HBZP02008 142 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 C10orf128Q5T292 105 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 HCP5Q6MZN7 132 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 RNASEKQ6P5S7 137 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 DRAM1Q8N682 238 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 OR5B3Q8NH48 314 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 IGFBPL1Q8WX77 278 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 CORO2AQ92828 525 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 ZNF503Q96F45 646 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 SSBP4Q9BWG4 385 aaPredicted RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 FNDC4Q9H6D8 234 aaPredicted RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 LIN7CQ9NUP9 197 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 TNRC6AQ8NDV7 1962 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 C10orf142B7Z368 130 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 KLRC4-KLRK1H3BQV0 150 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 PDE6DO43924 150 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 RPL8P62917 257 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 RAB31Q13636 194 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 TCTEX1D1Q8N7M0 179 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 DEFB124Q8NES8 71 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 OR4A5Q8NH83 315 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 MGST2Q99735 147 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 TTTY12Q9BZ98 90 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 METRNQ9UJH8 293 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 ARHGAP32A7KAX9 2087 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 JMJD1CQ15652 2540 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 SERTM2A0A1B0GWG4 89 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 FBLL1A6NHQ2 334 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 M0R296 226 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 COX7A1P24310 79 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 FOXA3P55318 350 aaPredicted RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 MLANAQ16655 118 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 SLC25A53Q5H9E4 307 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 PEAR1Q5VY43 1037 aaPredicted RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 FLYWCH2Q96CP2 140 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 ZNF355PQ9NSJ1 428 aa7.2□□□□□ -1.26
SMARCA1-203ENST00000371123 PAX2Q02962 417 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 ZNF503-AS2A6NEH8 195 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 Q71RC1 249 aaPredicted RBP7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 SAP25Q8TEE9 199 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 CCL13Q99616 98 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 LSM4Q9Y4Z0 139 aaKnown RBP7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 PKD1L2Q7Z442 2459 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 NHLH1Q02575 133 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 CR1LQ2VPA4 569 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 ZNF766Q5HY98 468 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 MOB3BQ86TA1 216 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 OR52E5Q8NH55 327 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 TMEM186Q96B77 213 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 LINC00479Q96M42 142 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 DYNLRB1Q9NP97 96 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 TMEM140Q9NV12 185 aa7.19□□□□□ -1.26
SMARCA1-203ENST00000371123 DOPEY1Q5JWR5 2465 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 IGHV3OR16-13A0A075B7E8 117 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 IGHV3-74A0A0B4J1X5 117 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 C9orf172C9J069 976 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 C17orf112F2Z3M2 114 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 STAG3L2P0CL84 134 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 STAG3L3P0CL85 134 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 C10orf35Q96D05 121 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 TMEM147Q9BVK8 224 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 MTORP42345 2549 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 OVOL3O00110 214 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 DKK1O94907 266 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 MPV17P39210 176 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 SRSF7Q16629 238 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 RPEL1Q2QD12 228 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 TMEM249Q2WGJ8 235 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 ACP7Q6ZNF0 438 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 BORCS7Q96B45 105 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 COMMD5Q9GZQ3 224 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 POLDIP2Q9Y2S7 368 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 SMIM27A0A1W2PRY6 76 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 C21orf140B9A014 251 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 CRXO43186 299 aaPredicted RBP7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 CRYBB3P26998 211 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 VWA1Q6PCB0 445 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 Q8TCH9 128 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 SMIM12Q96EX1 92 aa7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 KLF13Q9Y2Y9 288 aaPredicted RBP7.18□□□□□ -1.26
SMARCA1-203ENST00000371123 PCSK5Q92824 1860 aa7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 TMEM30CPA0ZSE6 113 aa7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 HSBP1O75506 76 aa7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 KLF7O75840 302 aaPredicted RBP7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 FGF6P10767 208 aa7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 OPRK1P41145 380 aa7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 MEF2CQ06413 473 aaPredicted RBP7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 CEP192Q8TEP8 1941 aa7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 TRAV3A0A0B4J244 114 aa7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 CNIH1O95406 144 aa7.17□□□□□ -1.26
SMARCA1-203ENST00000371123 NCR2O95944 276 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms