RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 RNF7Q9UBF6 113 aa14.14□□□□□ -0.15
PTP4A3-201ENST00000329397 CUL9Q8IWT3 2517 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 UPK2O00526 184 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 PYYP10082 97 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 GLRXP35754 106 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 CFHR2P36980 270 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 PRCDQ00LT1 54 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 STUMQ69YW2 141 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 SGK494Q96LW2 274 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 MRPL20Q9BYC9 149 aaKnown RBP14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 IL19Q9UHD0 177 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 CSTL1Q9H114 145 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 FAM215AQ9Y5M1 114 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 APC2O95996 2303 aa14.13□□□□□ -0.15
PTP4A3-201ENST00000329397 TRAV34A0A0B4J273 112 aa14.12□□□□□ -0.15
PTP4A3-201ENST00000329397 IRF2P14316 349 aa14.12□□□□□ -0.15
PTP4A3-201ENST00000329397 COMPP49747 757 aaPredicted RBP14.12□□□□□ -0.15
PTP4A3-201ENST00000329397 FAM19A2Q8N3H0 131 aa14.12□□□□□ -0.15
PTP4A3-201ENST00000329397 TECRQ9NZ01 308 aaKnown RBP14.12□□□□□ -0.15
PTP4A3-201ENST00000329397 PRNDQ9UKY0 176 aa14.12□□□□□ -0.15
PTP4A3-201ENST00000329397 IGLV2-8P01709 118 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 RNASE2P10153 161 aaKnown RBP14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 TIGITQ495A1 244 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 FTH1P19P0C7X4 201 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 APELAP0DMC3 54 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 SRIP30626 198 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 PRB3Q04118 309 aaPredicted RBP14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 LEMD1Q68G75 181 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 HARBI1Q96MB7 349 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 DNAJC4Q9NNZ3 241 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 TBL2Q9Y4P3 447 aaKnown RBP14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 REG1AP05451 166 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 AMTP48728 403 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 UBE2L3P68036 154 aaKnown RBP14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 RTL8BQ17RB0 113 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 IBA57Q5T440 356 aaKnown RBP14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 IGFL2Q6UWQ7 119 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 TMEM167BQ9NRX6 74 aa14.11□□□□□ -0.15
PTP4A3-201ENST00000329397 TIMM23BQ5SRD1 257 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 TMEM136Q6ZRR5 245 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 LOXL4Q96JB6 756 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 RNF2Q99496 336 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 MBD3L4A6NDZ8 208 aaPredicted RBP14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 MBD3L3A6NE82 208 aaPredicted RBP14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 MBD3L5A6NJ08 208 aaPredicted RBP14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 K7EM74 188 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 CX3CL1P78423 397 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 PRR27Q6MZM9 219 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 TEX43Q6ZNM6 134 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 C19orf35Q6ZS72 473 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 SLC25A48Q6ZT89 311 aaKnown RBP14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 SIGLECL1Q8N7X8 197 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 MBD3L2Q8NHZ7 208 aaPredicted RBP14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 VAMP8Q9BV40 100 aa14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 RPUSD1Q9UJJ7 312 aaKnown RBP14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 ZFHX2Q9C0A1 2572 aaPredicted RBP14.1□□□□□ -0.15
PTP4A3-201ENST00000329397 IGLV3-9A0A075B6K5 115 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 RANP62826 216 aaKnown RBP14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 PAFAH1B2P68402 229 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 VPS25Q9BRG1 176 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 SFXN3Q9BWM7 321 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 MRPL36Q9P0J6 103 aaKnown RBP14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 SLC25A10Q9UBX3 287 aaPredicted RBP14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 LRBAP50851 2863 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 ZNF253O75346 499 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 FCN3O75636 299 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 DLX1P56177 255 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 ZNF788Q6ZQV5 615 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 SLC25A33Q9BSK2 321 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 PPIAL4AQ9Y536 164 aa14.09□□□□□ -0.15
PTP4A3-201ENST00000329397 PPBPP02775 128 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 NTF3P20783 257 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 RUSC1-AS1Q66K80 236 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 ATOH7Q8N100 152 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 FAM222BQ8WU58 562 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 CORO2AQ92828 525 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 ADTRPQ96IZ2 230 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 SLC25A2Q9BXI2 301 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 ZNF355PQ9NSJ1 428 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 SVEP1Q4LDE5 3571 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 BMPR1BO00238 502 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 GPX1P07203 203 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 OR5G3P0C626 314 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 C8orf88P0DMB2 117 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 PRB4P10163 310 aaPredicted RBP14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 PTTG1IPP53801 180 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 GNG5P63218 68 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 CD69Q07108 199 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 SLAQ13239 276 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 POU2AF1Q16633 256 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 FAM167A-AS1Q96KT0 104 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 GNB1LQ9BYB4 327 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 COMMD5Q9GZQ3 224 aa14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 FNDC4Q9H6D8 234 aaPredicted RBP14.08□□□□□ -0.16
PTP4A3-201ENST00000329397 TFPI2P48307 235 aa14.07□□□□□ -0.16
PTP4A3-201ENST00000329397 NHLH1Q02575 133 aa14.07□□□□□ -0.16
PTP4A3-201ENST00000329397 IGF2BP2-AS1Q96M15 143 aa14.07□□□□□ -0.16
PTP4A3-201ENST00000329397 NRN1Q9NPD7 142 aa14.07□□□□□ -0.16
PTP4A3-201ENST00000329397 IGHV3-21A0A0B4J1V1 117 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms