RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 ERHP84090 104 aaKnown RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 FAM71F2Q6NXP2 309 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 RASL11AQ6T310 242 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 ZNF705AQ6ZN79 300 aaPredicted RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 FAM231DQ6ZW35 169 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 THAP8Q8NA92 274 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 OR4A5Q8NH83 315 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 OR2T6Q8NHC8 308 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 RCHY1Q96PM5 261 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 NRN1Q9NPD7 142 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 TBL2Q9Y4P3 447 aaKnown RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 IGKV1D-37A0A075B6S9 117 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 TRAV5A0A0B4J249 113 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 A0A1W2PN81 502 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 NKX6-3A6NJ46 265 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 E7EUB6 86 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 SPINK4O60575 86 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 MGST1P10620 155 aaKnown RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 CHRNB4P30926 498 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 CTRLP40313 264 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 SLC35B1P78383 322 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 SSBP2P81877 361 aaPredicted RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 WT1-ASQ06250 92 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 MRPL54Q6P161 138 aaKnown RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 PATE2Q6UY27 113 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 Q6ZS92 163 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 C8orf31Q8N9H6 132 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 OR4B1Q8NGF8 309 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 OR1L4Q8NGR5 311 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 ZNF596Q8TC21 504 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 FNDC4Q9H6D8 234 aaPredicted RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 PAM16Q9Y3D7 125 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 RP1L1Q8IWN7 2480 aaPredicted RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 TCRBV4S1A1TA0A5B7 111 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 COX7A2P2O60397 106 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 ZNF253O75346 499 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 ZNF324O75467 553 aaPredicted RBP7.03□□□□□ -1.28
CLK1-201ENST00000321356 IGLV2-23P01705 113 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 FOSL1P15407 271 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 SRIP30626 198 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 MYCNOSP40205 109 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 AMTP48728 403 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 FAM27E3Q08E93 113 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 KIAA1644Q3SXP7 199 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 TMEM200BQ69YZ2 307 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 ZNF329Q86UD4 541 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 NIT1Q86X76 327 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 PDPNQ86YL7 162 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 LINC00311Q8N616 119 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 OR4C13Q8NGP0 309 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 VSTM2AQ8TAG5 236 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 FAM168AQ92567 244 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 ST6GALNAC6Q969X2 333 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 FLYWCH2Q96CP2 140 aaKnown RBP7.03□□□□□ -1.28
CLK1-201ENST00000321356 LINC00479Q96M42 142 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 ZNF430Q9H8G1 570 aaPredicted RBP7.03□□□□□ -1.28
CLK1-201ENST00000321356 ZNF355PQ9NSJ1 428 aa7.03□□□□□ -1.28
CLK1-201ENST00000321356 AMMECR1Q9Y4X0 333 aaPredicted RBP7.03□□□□□ -1.28
CLK1-201ENST00000321356 EP300Q09472 2414 aaPredicted RBP7.03□□□□□ -1.28
CLK1-201ENST00000321356 DIRC3C9JPN6 131 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 PEX7O00628 323 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 APCSP02743 223 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 RPLP1P05386 114 aaKnown RBP7.02□□□□□ -1.28
CLK1-201ENST00000321356 PYYP10082 97 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 CCL3L1P16619 93 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 TNFRSF1AP19438 455 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 ZNF137PP52743 207 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 KRTDAPP60985 99 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 CCL8P80075 99 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 SLAQ13239 276 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 C10orf113Q5VZT2 155 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 PVRIGQ6DKI7 326 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 FXYD5Q96DB9 178 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 PAXXQ9BUH6 204 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 C7orf69Q9H7B7 122 aa7.02□□□□□ -1.28
CLK1-201ENST00000321356 MRPL27Q9P0M9 148 aaKnown RBP7.02□□□□□ -1.28
CLK1-201ENST00000321356 C17orf100A8MU93 164 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 TNFRSF13BO14836 293 aaPredicted RBP7.02□□□□□ -1.29
CLK1-201ENST00000321356 CA1P00915 261 aaPredicted RBP7.02□□□□□ -1.29
CLK1-201ENST00000321356 REG1BP48304 166 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 SUB1P53999 127 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLK1-201ENST00000321356 PRRX1P54821 245 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 BPIFB3P59826 476 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 MRGPRG-AS1Q2M3A8 158 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 C10orf55Q5SWW7 151 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 NHLRC2Q8NBF2 726 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 C18orf32Q8TCD1 76 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 TSKUQ8WUA8 353 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 NPIPB3Q92617 1050 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 TMEM186Q96B77 213 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 GRAMD2BQ96HH9 432 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 FAM103A1Q9BTL3 118 aaKnown RBP7.02□□□□□ -1.29
CLK1-201ENST00000321356 ZNF331Q9NQX6 463 aaPredicted RBP7.02□□□□□ -1.29
CLK1-201ENST00000321356 SERTAD4Q9NUC0 356 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 MRPL36Q9P0J6 103 aaKnown RBP7.02□□□□□ -1.29
CLK1-201ENST00000321356 DMXL1Q9Y485 3027 aa7.02□□□□□ -1.29
CLK1-201ENST00000321356 CNOT1A5YKK6 2376 aaKnown RBP7.01□□□□□ -1.29
CLK1-201ENST00000321356 OR2J3O76001 311 aa7.01□□□□□ -1.29
CLK1-201ENST00000321356 CRYGCP07315 174 aa7.01□□□□□ -1.29
CLK1-201ENST00000321356 C3orf79P0CE67 100 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms