RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 VPS13AQ96RL7 3174 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 TTC28Q96AY4 2481 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 IGLV3-9A0A075B6K5 115 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 IGHV3-64DA0A0J9YX35 117 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 SMCO3A2RU48 225 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 CCL21O00585 134 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 CDS2O95674 445 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 CFDP00746 253 aaPredicted RBP2.87□□□□□ -1.95
SMCO3-201ENST00000316048 IGHV2-5P01817 119 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 RCC1P18754 421 aaPredicted RBP2.87□□□□□ -1.95
SMCO3-201ENST00000316048 PVALBP20472 110 aaPredicted RBP2.87□□□□□ -1.95
SMCO3-201ENST00000316048 GZMHP20718 246 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 CFHR2P36980 270 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 CEACAM6P40199 344 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 KRTAP10-9P60411 292 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 S100A10P60903 97 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 RAB11AP62491 216 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 IL15RAQ13261 267 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 HERPUD1Q15011 391 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 IGFBP7Q16270 282 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 GPR157Q5UAW9 335 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 EIF5AL1Q6IS14 154 aaKnown RBP2.87□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF818PQ6ZRF7 136 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 PDZD9Q8IXQ8 264 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 H1FOOQ8IZA3 346 aaPredicted RBP2.87□□□□□ -1.95
SMCO3-201ENST00000316048 GAPTQ8N292 157 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 HSD17B11Q8NBQ5 300 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 OR5T1Q8NG75 326 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 OR11L1Q8NGX0 322 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 OR5B3Q8NH48 314 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 C7orf33Q8WU49 177 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 LRRC29Q8WV35 223 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 IL22RA2Q969J5 263 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 TMEM56Q96MV1 263 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 SPIN2AQ99865 258 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 SPIN2BQ9BPZ2 258 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 RAB1BQ9H0U4 201 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 PLEKHF2Q9H8W4 249 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 TAF9BQ9HBM6 251 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 CCL28Q9NRJ3 127 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 TMEM56-RWDD3S4R434 201 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 FRYLO94915 3013 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 EP300Q09472 2414 aaPredicted RBP2.87□□□□□ -1.95
SMCO3-201ENST00000316048 RTTNQ86VV8 2226 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 IGKV1-6A0A0C4DH72 117 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 C12orf77C9JDV5 145 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 ATP6V1G2-DDX39BF2Z307 99 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 H0Y980 276 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 K7EPK0 472 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 PGLYRP1O75594 196 aaPredicted RBP2.86□□□□□ -1.95
SMCO3-201ENST00000316048 DEDDO75618 318 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 SERPINE2P07093 398 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 TPT1P13693 172 aaKnown RBP2.86□□□□□ -1.95
SMCO3-201ENST00000316048 M6PRP20645 277 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 F2RP25116 425 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 RPL12P30050 165 aaKnown RBP2.86□□□□□ -1.95
SMCO3-201ENST00000316048 GABRA2P47869 451 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 CAV2P51636 162 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 SPCS3P61009 180 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 TNFAIP6P98066 277 aaPredicted RBP2.86□□□□□ -1.95
SMCO3-201ENST00000316048 HMGN3Q15651 99 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 C11orf71Q6IPW1 123 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 ALKAL2Q6UX46 152 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 LYZL2Q7Z4W2 148 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 LRP11Q86VZ4 500 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 FAM71E2Q8N5Q1 922 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 NKAPP1Q8N9T2 125 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 OR1S1Q8NH92 325 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 AQP10Q96PS8 301 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 OR2V2Q96R30 315 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 TNFRSF19Q9NS68 423 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 NUP50Q9UKX7 468 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 LSM5Q9Y4Y9 91 aaKnown RBP2.86□□□□□ -1.95
SMCO3-201ENST00000316048 IGKV1D-13A0A0B4J2D9 117 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 LEUTXA8MZ59 168 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 AGPAT2O15120 278 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 ATG12O94817 140 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 LHBP01229 141 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 OR8U9P0C7N5 309 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 IGKV1-13P0DP09 117 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 PSG2P11465 335 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 PAX5Q02548 391 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 AESQ08117 197 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 IL34Q6ZMJ4 242 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 COMMD7Q86VX2 200 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 BAP18Q8IXM2 172 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 TMEM61Q8N0U2 210 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF561Q8N587 486 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 LINC00612Q8N6U2 182 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 TCTEX1D1Q8N7M0 179 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 SLC35G3Q8N808 338 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 OR8U1Q8NH10 309 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 RNASE11Q8TAA1 199 aaKnown RBP2.86□□□□□ -1.95
SMCO3-201ENST00000316048 RBPMSQ93062 196 aaKnown RBP2.86□□□□□ -1.95
SMCO3-201ENST00000316048 ARL11Q969Q4 196 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 ABHD14BQ96IU4 210 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 TP53RKQ96S44 253 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 HIST1H4GQ99525 98 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 TOLLIPQ9H0E2 274 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 OR2S2Q9NQN1 319 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms