RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 OTOFQ9HC10 1997 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 TRBV9A0A0B4J1U6 114 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 NAT1P18440 290 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 TMEM155Q4W5P6 130 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 ZNF660Q6AZW8 331 aaPredicted RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 ZNF474Q6S9Z5 364 aaPredicted RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 ZNF329Q86UD4 541 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 PAQR4Q8N4S7 273 aaPredicted RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 A0A087WX48 190 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 ADARB2-AS1A8MUL3 147 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 HOXA5P20719 270 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 CSRP3P50461 194 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 HEPN1Q6WQI6 88 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 TMEM144Q7Z5S9 345 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 GLRX5Q86SX6 157 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 DTX1Q86Y01 620 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 USMG5Q96IX5 58 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 RPP21Q9H633 154 aaKnown RBP5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 BEX4Q9NWD9 120 aaPredicted RBP5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 PIKFYVEQ9Y2I7 2098 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 SVILO95425 2214 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 DPRXA6NFQ7 191 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 TCF21O43680 179 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 TBX6O95947 436 aaPredicted RBP5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 PLA2G2CQ5R387 149 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 SPSB3Q6PJ21 355 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 FBLIM1Q8WUP2 373 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 FOLR2P14207 255 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 CCL1P22362 96 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 PRCDQ00LT1 54 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 ACTL10Q5JWF8 245 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 RCHY1Q96PM5 261 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 RNF5Q99942 180 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 LINC00862A6NCI5 91 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 FAM223BA6NKX1 122 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 BUB1B-PAK6H3BSN5 160 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 RPLP1P05386 114 aaKnown RBP5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 CR1LQ2VPA4 569 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 KIAA1644Q3SXP7 199 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 RUSC1-AS1Q66K80 236 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 FAM223AQ8IWN6 122 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 PGPEP1Q9NXJ5 209 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 RAMP3O60896 148 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 SELLP14151 372 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 EGR1P18146 543 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 OTX1P32242 354 aaPredicted RBP5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 DUTP33316 252 aaKnown RBP5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 GATA4P43694 442 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 Q6AWC8 147 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 LINC00469Q8N7U9 141 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 BEND2Q8NDZ0 799 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 C18orf15Q96N68 181 aa5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 NXT2Q9NPJ8 142 aaKnown RBP5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 F11RQ9Y624 299 aaKnown RBP5.72□□□□□ -1.49
GAPVD1-202ENST00000297933 LCTP09848 1927 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 A0A1B0GUT8 65 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 EFNA2O43921 213 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 TMEM50AO95807 157 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 DANCRP0C864 163 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 IGFBP3P17936 291 aaPredicted RBP5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 SAA4P35542 130 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 IFI27P40305 119 aaPredicted RBP5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 FXYD7P58549 80 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 BIVMQ86UB2 503 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 GAFA1Q96PS6 74 aa5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 MCRIP2Q9BUT9 160 aaKnown RBP5.71□□□□□ -1.49
GAPVD1-202ENST00000297933 A0A1B0GW15 77 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 SLC25A20O43772 301 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 PMCHL1Q16048 86 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 SPATA45Q537H7 98 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 TMEM136Q6ZRR5 245 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 THSD7BQ9C0I4 1608 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 TRBV7-9A0A0J9YWB2 115 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 SCO2A0A1W2PP80 73 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 ATP5LO75964 103 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 RIPPLY3P57055 190 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 CD177Q8N6Q3 437 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 DNAJC13O75165 2243 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 TRGV1A0A0A0MS02 117 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 GNG5P63218 68 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 OR1P1Q8NH06 330 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 NUDT11Q96G61 164 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 VCX2Q9H322 139 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 PEF1Q9UBV8 284 aaKnown RBP5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 APC2O95996 2303 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 PSPNO60542 156 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 COTL1Q14019 142 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 IGFL3Q6UXB1 125 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 SLC25A48Q6ZT89 311 aaKnown RBP5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 OR11H1Q8NG94 326 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 OR11H2Q8NH07 326 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 FAM131CQ96AQ9 280 aa5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 RTBDNQ9BSG5 229 aaPredicted RBP5.71□□□□□ -1.5
GAPVD1-202ENST00000297933 FAM90A9PA6NNJ1 464 aa5.7□□□□□ -1.5
GAPVD1-202ENST00000297933 CD8AP01732 235 aa5.7□□□□□ -1.5
GAPVD1-202ENST00000297933 C5orf64Q2M2E5 130 aa5.7□□□□□ -1.5
GAPVD1-202ENST00000297933 LBHQ53QV2 105 aaPredicted RBP5.7□□□□□ -1.5
GAPVD1-202ENST00000297933 LCN12Q6JVE5 192 aa5.7□□□□□ -1.5
GAPVD1-202ENST00000297933 LYPD2Q6UXB3 125 aa5.7□□□□□ -1.5
GAPVD1-202ENST00000297933 UBE2E2Q96LR5 201 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms