RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 FBLL1A6NHQ2 334 aaKnown RBP15.35■□□□□ 0.05
PCDH1-201ENST00000287008 ERVH48-1M5A8F1 160 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 TCTAP57738 103 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 CYB5R2Q6BCY4 276 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 PSMB11A5LHX3 300 aa15.34■□□□□ 0.05
PCDH1-201ENST00000287008 FAM169BQ8N8A8 192 aa15.34■□□□□ 0.05
PCDH1-201ENST00000287008 EFNB1P98172 346 aa15.34■□□□□ 0.05
PCDH1-201ENST00000287008 SP5Q6BEB4 398 aaPredicted RBP15.34■□□□□ 0.05
PCDH1-201ENST00000287008 IFT22Q9H7X7 185 aa15.34■□□□□ 0.05
PCDH1-201ENST00000287008 DUSP14O95147 198 aaKnown RBP15.34■□□□□ 0.05
PCDH1-201ENST00000287008 TMEM219Q86XT9 240 aa15.34■□□□□ 0.05
PCDH1-201ENST00000287008 IGFL3Q6UXB1 125 aa15.33■□□□□ 0.05
PCDH1-201ENST00000287008 BRD3OSQ6XYD6 125 aa15.33■□□□□ 0.05
PCDH1-201ENST00000287008 BPESC1Q9GZL8 116 aa15.33■□□□□ 0.05
PCDH1-201ENST00000287008 Q9H3A6 140 aa15.33■□□□□ 0.05
PCDH1-201ENST00000287008 IGKV1D-8A0A087WSZ0 117 aa15.33■□□□□ 0.04
PCDH1-201ENST00000287008 GGCTO75223 188 aaKnown RBP15.33■□□□□ 0.04
PCDH1-201ENST00000287008 NSUN5P1Q3KNT7 163 aa15.33■□□□□ 0.04
PCDH1-201ENST00000287008 A0A087X0M5 115 aa15.33■□□□□ 0.04
PCDH1-201ENST00000287008 A0A1B0GX30 115 aa15.33■□□□□ 0.04
PCDH1-201ENST00000287008 CIRBPQ14011 172 aaKnown RBP15.33■□□□□ 0.04
PCDH1-201ENST00000287008 SMIM6P0DI80 62 aa15.33■□□□□ 0.04
PCDH1-201ENST00000287008 SUMO2P61956 95 aaKnown RBP15.33■□□□□ 0.04
PCDH1-201ENST00000287008 PAX8Q06710 450 aa15.33■□□□□ 0.04
PCDH1-201ENST00000287008 TMEM238LA0A1B0GVL6 79 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 A6NJY4 79 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 LY6HO94772 140 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 PAX1P15863 534 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 KLRD1Q13241 179 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 OTOGLQ3ZCN5 2332 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 A0A0A6YYD4 124 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 TRBV9A0A0B4J1U6 114 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 A0A1B0GUT8 65 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 REC114Q7Z4M0 266 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 TRAV20A0A0B4J274 112 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 LY6G6EA0A0G2JKS1 128 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 M0R1W7 72 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 ID3Q02535 119 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 TPTE2P1Q5T6R2 138 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 U3KQA8 63 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 MALRD1Q5VYJ5 2156 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 IGKV1-27A0A075B6S5 117 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 COX6CP09669 75 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 CD177Q8N6Q3 437 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 SDF2L1Q9HCN8 221 aa15.32■□□□□ 0.04
PCDH1-201ENST00000287008 CIDEAO60543 219 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 NAT1P18440 290 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 MEIG1Q5JSS6 88 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 C10orf55Q5SWW7 151 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 FAM90A9PA6NNJ1 464 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 C1QTNF9BB2RNN3 333 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 C1QTNF9P0C862 333 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 TAS2R60P59551 318 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 OR4D5Q8NGN0 318 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 RAB37Q96AX2 223 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 RNF5Q99942 180 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 MLNRO43193 412 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 DTX1Q86Y01 620 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 C18orf12Q96KH6 178 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 IGHV1-3A0A0C4DH29 117 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 TMEM136Q6ZRR5 245 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 TMEM101Q96IK0 257 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 KCNS1Q96KK3 526 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 PNRC2Q9NPJ4 139 aaKnown RBP15.31■□□□□ 0.04
PCDH1-201ENST00000287008 ZNF257Q9Y2Q1 563 aa15.31■□□□□ 0.04
PCDH1-201ENST00000287008 COL4A6Q14031 1691 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 RPL24P83731 157 aaKnown RBP15.3■□□□□ 0.04
PCDH1-201ENST00000287008 PMCHL1Q16048 86 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 SRSF7Q16629 238 aaKnown RBP eCLIP15.3■□□□□ 0.04
PCDH1-201ENST00000287008 LEMD1Q68G75 181 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 FMC1Q96HJ9 113 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 FABP5P3A8MUU1 101 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 RNASE4P34096 147 aaKnown RBP15.3■□□□□ 0.04
PCDH1-201ENST00000287008 FOXA3P55318 350 aaPredicted RBP15.3■□□□□ 0.04
PCDH1-201ENST00000287008 OTORQ9NRC9 128 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 GRIFINA4D1Z8 144 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 E7EQL1 145 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 LGALS3P17931 250 aaKnown RBP15.3■□□□□ 0.04
PCDH1-201ENST00000287008 OTX1P32242 354 aaPredicted RBP15.3■□□□□ 0.04
PCDH1-201ENST00000287008 NEUROG1Q92886 237 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 ASCL2Q99929 193 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 ATG101Q9BSB4 218 aa15.3■□□□□ 0.04
PCDH1-201ENST00000287008 F8VVB4 439 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 F8VWA3 439 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 OR1P1Q8NH06 330 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 LRRK1Q38SD2 2015 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 SCO2A0A1W2PP80 73 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 TMEM42Q69YG0 159 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 Q6AWC8 147 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 J3QKU1 62 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 ATP5G3P48201 142 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 MARVELD3Q96A59 401 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 TGIF2-C20orf24A0A0A6YYL0 155 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 COL8A2P25067 703 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 GTSCR1Q86UQ5 136 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 PRSS33Q8NF86 280 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 GLMPQ8WWB7 406 aa15.29■□□□□ 0.04
PCDH1-201ENST00000287008 NDUFS8O00217 210 aa15.28■□□□□ 0.04
PCDH1-201ENST00000287008 C15orf32Q32M92 178 aa15.28■□□□□ 0.04
PCDH1-201ENST00000287008 TMEM155Q4W5P6 130 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms