RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 BRD3OSQ6XYD6 125 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 RXFP4Q8TDU9 374 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 ARPC1AQ92747 370 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 SLC25A33Q9BSK2 321 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 WNT10AQ9GZT5 417 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 MEGF9Q9H1U4 602 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 IGKV1D-37A0A075B6S9 117 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 IFNA1P01562 189 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 IGHV3-48P01763 117 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 HLA-DRB1P01911 266 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 NDPQ00604 133 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 TMEM116Q8NCL8 245 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 FAM103A1Q9BTL3 118 aaKnown RBP17.48■□□□□ 0.39
CCDC7-201ENST00000277657 TMPRSS5Q9H3S3 457 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 NAV2Q8IVL1 2488 aa17.47■□□□□ 0.39
CCDC7-201ENST00000277657 DOPEY2Q9Y3R5 2298 aa17.47■□□□□ 0.39
CCDC7-201ENST00000277657 RND2P52198 227 aa17.47■□□□□ 0.39
CCDC7-201ENST00000277657 RBMS3Q6XE24 437 aaKnown RBP17.47■□□□□ 0.39
CCDC7-201ENST00000277657 CYP2G1PQ6ZSU1 146 aa17.47■□□□□ 0.39
CCDC7-201ENST00000277657 VAX2Q9UIW0 290 aa17.47■□□□□ 0.39
CCDC7-201ENST00000277657 CELSR1Q9NYQ6 3014 aa17.47■□□□□ 0.39
CCDC7-201ENST00000277657 TSPAN9O75954 239 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 MT-CO2P00403 227 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 STAG3L2P0CL84 134 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 STAG3L3P0CL85 134 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 RHOBP62745 196 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 ASPHD1Q5U4P2 390 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 SLC35E3Q7Z769 313 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 OR1L6Q8NGR2 347 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 MBD6Q96DN6 1003 aa17.46■□□□□ 0.39
CCDC7-201ENST00000277657 NKX6-2Q9C056 277 aaPredicted RBP17.46■□□□□ 0.39
CCDC7-201ENST00000277657 IGHV7-81A0A0B4J1V7 117 aa17.46■□□□□ 0.38
CCDC7-201ENST00000277657 A0A0U1RQK1 487 aa17.46■□□□□ 0.38
CCDC7-201ENST00000277657 TCRBV4S1A1TA0A5B7 111 aa17.46■□□□□ 0.38
CCDC7-201ENST00000277657 NPIPB5A8MRT5 1133 aa17.46■□□□□ 0.38
CCDC7-201ENST00000277657 I3L2K1 104 aa17.46■□□□□ 0.38
CCDC7-201ENST00000277657 GATA2P23769 480 aaPredicted RBP17.46■□□□□ 0.38
CCDC7-201ENST00000277657 SEPSECSQ9HD40 501 aaKnown RBP17.46■□□□□ 0.38
CCDC7-201ENST00000277657 SNAPINO95295 136 aa17.45■□□□□ 0.38
CCDC7-201ENST00000277657 AVPP01185 164 aa17.45■□□□□ 0.38
CCDC7-201ENST00000277657 TAGLN2P37802 199 aaKnown RBP17.45■□□□□ 0.38
CCDC7-201ENST00000277657 KLF17Q5JT82 389 aaPredicted RBP17.45■□□□□ 0.38
CCDC7-201ENST00000277657 PIFOQ8TCI5 191 aa17.45■□□□□ 0.38
CCDC7-201ENST00000277657 C19orf24Q9BVV8 132 aa17.45■□□□□ 0.38
CCDC7-201ENST00000277657 MANBALQ9NQG1 85 aa17.45■□□□□ 0.38
CCDC7-201ENST00000277657 NBPF19A0A087WUL8 3843 aa17.45■□□□□ 0.38
CCDC7-201ENST00000277657 HELZ2Q9BYK8 2649 aaKnown RBP17.44■□□□□ 0.38
CCDC7-201ENST00000277657 FBP1P09467 338 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 PSMB3P49720 205 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 SOHLH1Q5JUK2 328 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 Q5PR19 223 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 C22orf15Q8WYQ4 148 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 RASL11BQ9BPW5 248 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 EGR2P11161 476 aaPredicted RBP17.44■□□□□ 0.38
CCDC7-201ENST00000277657 SELENOTP62341 195 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 TTC9CQ8N5M4 171 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 CYB561D1Q8N8Q1 229 aa17.44■□□□□ 0.38
CCDC7-201ENST00000277657 CSMD1Q96PZ7 3565 aa17.43■□□□□ 0.38
CCDC7-201ENST00000277657 PSMB11A5LHX3 300 aa17.43■□□□□ 0.38
CCDC7-201ENST00000277657 RNF223E7ERA6 249 aa17.43■□□□□ 0.38
CCDC7-201ENST00000277657 ZNF90Q03938 601 aa17.43■□□□□ 0.38
CCDC7-201ENST00000277657 SPATA31B1PQ5VZV4 182 aa17.43■□□□□ 0.38
CCDC7-201ENST00000277657 TRGV9Q99603 122 aa17.43■□□□□ 0.38
CCDC7-201ENST00000277657 J3QLI3 93 aa17.42■□□□□ 0.38
CCDC7-201ENST00000277657 CXorf1O96002 111 aa17.42■□□□□ 0.38
CCDC7-201ENST00000277657 OR5G3P0C626 314 aa17.42■□□□□ 0.38
CCDC7-201ENST00000277657 ARL14EPLP0DKL9 152 aa17.42■□□□□ 0.38
CCDC7-201ENST00000277657 NPBWR1P48145 328 aa17.42■□□□□ 0.38
CCDC7-201ENST00000277657 BTN1A1Q13410 526 aa17.42■□□□□ 0.38
CCDC7-201ENST00000277657 FUT9Q9Y231 359 aa17.42■□□□□ 0.38
CCDC7-201ENST00000277657 IGHV3-21A0A0B4J1V1 117 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 K7EIM0 57 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 NDUFS6O75380 124 aaKnown RBP17.41■□□□□ 0.38
CCDC7-201ENST00000277657 MEF2BQ02080 365 aaPredicted RBP17.41■□□□□ 0.38
CCDC7-201ENST00000277657 FAM78BQ5VT40 261 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 PRSS57Q6UWY2 283 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 SPNS3Q6ZMD2 512 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 CLRN3Q8NCR9 226 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 GATAD1Q8WUU5 269 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 RBM14Q96PK6 669 aaKnown RBP17.41■□□□□ 0.38
CCDC7-201ENST00000277657 HSPB9Q9BQS6 159 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 TNFRSF19Q9NS68 423 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 ABCA1O95477 2261 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 CD81P60033 236 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 KRTAP1-3Q8IUG1 177 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 IQCF2Q8IXL9 164 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 C5orf56Q8N8D9 126 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 OR4X1Q8NH49 305 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 TMEM37Q8WXS4 190 aa17.41■□□□□ 0.38
CCDC7-201ENST00000277657 IGLV11-55A0A075B6I3 123 aa17.4■□□□□ 0.38
CCDC7-201ENST00000277657 MIR17HGQ75NE6 70 aa17.4■□□□□ 0.38
CCDC7-201ENST00000277657 MAPK1IP1LQ8NDC0 245 aa17.4■□□□□ 0.38
CCDC7-201ENST00000277657 FANCD2OSQ96PS1 177 aa17.4■□□□□ 0.38
CCDC7-201ENST00000277657 CR1P17927 2039 aa17.4■□□□□ 0.38
CCDC7-201ENST00000277657 NANPQ8TBE9 248 aa17.39■□□□□ 0.38
CCDC7-201ENST00000277657 SSX3Q99909 188 aa17.39■□□□□ 0.38
CCDC7-201ENST00000277657 SOX21Q9Y651 276 aaPredicted RBP17.39■□□□□ 0.38
CCDC7-201ENST00000277657 PAGE4O60829 102 aa17.39■□□□□ 0.37
CCDC7-201ENST00000277657 IGHV4-31P0DP07 118 aa17.39■□□□□ 0.37
CCDC7-201ENST00000277657 FAM90A2PQ658T7 463 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms