RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 MBD3L1Q8WWY6 194 aa13.79□□□□□ -0.2
PTK7-202ENST00000230419 MBNL3Q9NUK0 354 aaKnown RBP13.79□□□□□ -0.2
PTK7-202ENST00000230419 RBFOX2O43251 390 aaKnown RBP eCLIP13.78□□□□□ -0.28e-18■■■■□ 21.9
PTK7-202ENST00000230419 IGKV1D-33P01593 117 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 IGKV1-33P01594 117 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 NAV2Q8IVL1 2488 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 IGHV3-66A0A0C4DH42 116 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 DIRC3C9JPN6 131 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 UPK2O00526 184 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 APOBEC3AP31941 199 aaPredicted RBP13.78□□□□□ -0.2
PTK7-202ENST00000230419 TUBA4BQ9H853 241 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 LINC00312Q9Y6C7 94 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 SORL1Q92673 2214 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 DPRXA6NFQ7 191 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 C10orf142B7Z368 130 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 HIST1H1EP10412 219 aaKnown RBP13.78□□□□□ -0.2
PTK7-202ENST00000230419 CCKARP32238 428 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 PKIAP61925 76 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
PTK7-202ENST00000230419 NUP210LQ5VU65 1888 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 LRRK2Q5S007 2527 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 IL4P05112 153 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 SOD3P08294 240 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 LGALS7P47929 136 aa13.78□□□□□ -0.2
PTK7-202ENST00000230419 OSR1Q8TAX0 266 aaPredicted RBP13.78□□□□□ -0.2
PTK7-202ENST00000230419 C5orf52A6NGY3 159 aa13.77□□□□□ -0.2
PTK7-202ENST00000230419 LCN2P80188 198 aa13.77□□□□□ -0.2
PTK7-202ENST00000230419 FAM19A2Q8N3H0 131 aa13.77□□□□□ -0.2
PTK7-202ENST00000230419 C5orf17Q8NAS9 161 aa13.77□□□□□ -0.2
PTK7-202ENST00000230419 RPUSD1Q9UJJ7 312 aaKnown RBP13.77□□□□□ -0.2
PTK7-202ENST00000230419 HAPLN4Q86UW8 402 aa13.77□□□□□ -0.21
PTK7-202ENST00000230419 MGST2Q99735 147 aa13.77□□□□□ -0.21
PTK7-202ENST00000230419 UFC1Q9Y3C8 167 aa13.77□□□□□ -0.21
PTK7-202ENST00000230419 ZNF207O43670 478 aaKnown RBP13.77□□□□□ -0.21
PTK7-202ENST00000230419 DDTP30046 118 aa13.77□□□□□ -0.21
PTK7-202ENST00000230419 SELENOTP62341 195 aa13.77□□□□□ -0.21
PTK7-202ENST00000230419 C19orf35Q6ZS72 473 aa13.77□□□□□ -0.21
PTK7-202ENST00000230419 NAV3Q8IVL0 2385 aa13.77□□□□□ -0.21
PTK7-202ENST00000230419 SRSF7Q16629 238 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTK7-202ENST00000230419 FAM90A2PQ658T7 463 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 Q6ZS49 121 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 SLC25A33Q9BSK2 321 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 TRBV6-6A0A0A6YYG2 114 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 OR5AL1P0C617 328 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 BRS3P32247 399 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 ZNF134P52741 427 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 MBNL2Q5VZF2 373 aaKnown RBP13.76□□□□□ -0.21
PTK7-202ENST00000230419 ZNF726P1Q15940 193 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 A0A087WWC5 75 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 NBEAP1P0C6P0 100 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 TIMP3P35625 211 aa13.76□□□□□ -0.21
PTK7-202ENST00000230419 FOXA2Q9Y261 457 aaPredicted RBP13.76□□□□□ -0.21
PTK7-202ENST00000230419 B9A039 149 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 VAMP3Q15836 100 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 WFDC3Q8IUB2 231 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 TMEM183AQ8IXX5 376 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 STXBP6Q8NFX7 210 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 FAM215AQ9Y5M1 114 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 TEX50A0A1B0GTY4 177 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 PPOXP50336 477 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 TMPRSS3P57727 454 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 RELBQ01201 579 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 KLF17Q5JT82 389 aaPredicted RBP13.75□□□□□ -0.21
PTK7-202ENST00000230419 TMEM200BQ69YZ2 307 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 TMEM144Q7Z5S9 345 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 ERVK11-1P61568 191 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 NHLH1Q02575 133 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 ASCL2Q99929 193 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 SSBP4Q9BWG4 385 aaPredicted RBP13.75□□□□□ -0.21
PTK7-202ENST00000230419 SPRY4Q9C004 299 aa13.75□□□□□ -0.21
PTK7-202ENST00000230419 A0A1B0GUS0 222 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 S100A7P31151 101 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 LY6EQ16553 131 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 SRSF12Q8WXF0 261 aaKnown RBP13.74□□□□□ -0.21
PTK7-202ENST00000230419 LIPFP07098 398 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 LOC105371242A0A075B767 164 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 MBD3L4A6NDZ8 208 aaPredicted RBP13.74□□□□□ -0.21
PTK7-202ENST00000230419 MBD3L3A6NE82 208 aaPredicted RBP13.74□□□□□ -0.21
PTK7-202ENST00000230419 MBD3L5A6NJ08 208 aaPredicted RBP13.74□□□□□ -0.21
PTK7-202ENST00000230419 AMY1AP04745 511 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 UNQ5815/PRO19632Q6UWF5 114 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 Q6ZS92 163 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 GBGT1Q8N5D6 347 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 MBD3L2Q8NHZ7 208 aaPredicted RBP13.74□□□□□ -0.21
PTK7-202ENST00000230419 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
PTK7-202ENST00000230419 LRP4O75096 1905 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 OR4A5Q8NH83 315 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 HTN1P15515 57 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 ADIPOQQ15848 244 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 SSX8Q7RTT4 187 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 KLHDC1Q8N7A1 406 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 OR8A1Q8NGG7 326 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 LINC00479Q96M42 142 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 TXNDC17Q9BRA2 123 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 ELOVL5Q9NYP7 299 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 A0A1B0GV90 55 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 M0R143 59 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 VENTXO95231 258 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 DIAPH2-AS1Q14236 149 aa13.73□□□□□ -0.21
PTK7-202ENST00000230419 UBE2CO00762 179 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms