RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 DEPPQ9NTK1 212 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 F5P12259 2224 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 FOXF2Q12947 444 aa11.02□□□□□ -0.64
COL1A1-201ENST00000225964 RNF182Q8N6D2 247 aa11.02□□□□□ -0.64
COL1A1-201ENST00000225964 RTBDNQ9BSG5 229 aaPredicted RBP11.02□□□□□ -0.64
COL1A1-201ENST00000225964 NRXN2Q9P2S2 1712 aa11.02□□□□□ -0.64
COL1A1-201ENST00000225964 GHRHP01286 108 aa11.02□□□□□ -0.64
COL1A1-201ENST00000225964 CKS1BP61024 79 aa11.02□□□□□ -0.64
COL1A1-201ENST00000225964 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.64
COL1A1-201ENST00000225964 TRAV2A0A0B4J234 112 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 STAG3L3P0CL85 134 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 ST6GALNAC3Q8NDV1 305 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 RNASE7Q9H1E1 156 aaKnown RBP11.02□□□□□ -0.65
COL1A1-201ENST00000225964 LINC00158P58513 81 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 CTAG1AP78358 180 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 CFHR1Q03591 330 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 UNQ6494/PRO21346Q6UXR6 183 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 RCHY1Q96PM5 261 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 ZXDCQ2QGD7 858 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-201ENST00000225964 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 BRCA1P38398 1863 aaKnown RBP11.02□□□□□ -0.65
COL1A1-201ENST00000225964 A0A0U1RRA0 63 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 CD59P13987 128 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 C3orf56Q8N813 242 aa11.02□□□□□ -0.65
COL1A1-201ENST00000225964 PEF1Q9UBV8 284 aaKnown RBP11.02□□□□□ -0.65
COL1A1-201ENST00000225964 CKAP5Q14008 2032 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 CMC4P56277 68 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-201ENST00000225964 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 MLNRO43193 412 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 SRSF1Q07955 248 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL1A1-201ENST00000225964 FAM19A2Q8N3H0 131 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 IGHV3-53P01767 116 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 Q5BKY6 102 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 FBLIM1Q8WUP2 373 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 WBP1Q96G27 269 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 CHTOPQ9Y3Y2 248 aaKnown RBP11.01□□□□□ -0.65
COL1A1-201ENST00000225964 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 PYYP10082 97 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 UCP1P25874 307 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 EFNA4P52798 201 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 LYZL4Q96KX0 146 aa11.01□□□□□ -0.65
COL1A1-201ENST00000225964 DDTP30046 118 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 NPC2P61916 151 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 CACNA1GO43497 2377 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 MDC1Q14676 2089 aaKnown RBP11□□□□□ -0.65
COL1A1-201ENST00000225964 MPTX1A8MV57 137 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 BRD3OSQ6XYD6 125 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 VWCEQ96DN2 955 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 IGHV2-26A0A0B4J1V2 119 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 A0A1B0GV72 72 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 OVOL1O14753 267 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 COQ2Q96H96 371 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 SSBP4Q9BWG4 385 aaPredicted RBP11□□□□□ -0.65
COL1A1-201ENST00000225964 DEFB104AQ8WTQ1 72 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 A0A087WX48 190 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 C18orf12Q96KH6 178 aa11□□□□□ -0.65
COL1A1-201ENST00000225964 SPAG8Q99932 426 aaPredicted RBP11□□□□□ -0.65
COL1A1-201ENST00000225964 KLHL30-AS1Q8NEE0 82 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 LINC00614P0C842 121 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 EPDR1Q9UM22 224 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 PSG8Q9UQ74 426 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 PTPRFP10586 1907 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 TMEM144Q7Z5S9 345 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 ZNF525Q8N782 197 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 IGKV2-40A0A087WW87 121 aaPredicted RBP10.99□□□□□ -0.65
COL1A1-201ENST00000225964 IGKV2D-40P01614 121 aaPredicted RBP10.99□□□□□ -0.65
COL1A1-201ENST00000225964 CD55P08174 381 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 C20orf204Q6ZNR8 217 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 CRIM1Q9NZV1 1036 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 XIRP1Q702N8 1843 aaKnown RBP10.99□□□□□ -0.65
COL1A1-201ENST00000225964 ZNF98A6NK75 572 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 ACTL10Q5JWF8 245 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 SFTA2Q6UW10 78 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 CYSLTR1Q9Y271 337 aa10.99□□□□□ -0.65
COL1A1-201ENST00000225964 RPL15P61313 204 aaKnown RBP10.98□□□□□ -0.65
COL1A1-201ENST00000225964 LCNL1Q6ZST4 164 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 OR10W1Q8NGF6 305 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 TRGV1A0A0A0MS02 117 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 FAM169BQ8N8A8 192 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 TRBV6-7A0A0A0MS04 114 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 TMEM86BQ8N661 226 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 ZFP36L1Q07352 338 aaKnown RBP10.98□□□□□ -0.65
COL1A1-201ENST00000225964 TMEM200BQ69YZ2 307 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 MBNL3Q9NUK0 354 aaKnown RBP10.98□□□□□ -0.65
COL1A1-201ENST00000225964 IGKV1D-13A0A0B4J2D9 117 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 IGKV1-13P0DP09 117 aa10.98□□□□□ -0.65
COL1A1-201ENST00000225964 HBDP02042 147 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 RALGAPA2Q2PPJ7 1873 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 B4DSR2 109 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 H3BUX3 64 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 LOC102723996A0A087X1L8 192 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 PGPEP1LA6NFU8 196 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 CA1P00915 261 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-201ENST00000225964 C15orf32Q32M92 178 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 KNL1Q8NG31 2342 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 ADMP35318 185 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 TPTE2P1Q5T6R2 138 aa10.97□□□□□ -0.65
COL1A1-201ENST00000225964 GTF3AQ92664 365 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms