RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Samt1A2BED8 237 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Wfdc8Q4KUS1 273 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Prss3Q792Z0 246 aaKnown RBP13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr876Q7TRE4 310 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Tmem147Q9CQG6 224 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Trbv5A0A0B4J1G9 113 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Rnf212bD3Z423 297 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr869E9PX82 323 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 InmtP40936 264 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Rab7aP51150 207 aaKnown RBP13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Pax5Q02650 391 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr987Q7TRA2 309 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Aqp6Q8C4A0 293 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr593Q8VF28 327 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr1295Q8VF48 312 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr1368Q8VFG3 314 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Eaf1Q9D4C5 268 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Adamts9E9PUN6 1931 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm15140A2BEE3 237 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 MENTQ569E4 350 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 2900055J20RikQ9D6G3 140 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Try5Q9QUK9 246 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Try4Q9R0T7 246 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Igf2P09535 180 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr15P23275 312 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Lclat1Q3UN02 376 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Vgll1Q99NC0 307 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Rtn4rQ99PI8 473 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Tmem54Q9D7S1 219 aa13.45□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gpr183Q3U6B2 357 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Plppr1Q8BFZ2 325 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr1262Q8VGN2 304 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 H1fooQ8VIK3 304 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 GmppaQ922H4 420 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Rarres2Q9DD06 162 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Fam89bQ9QUI1 189 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Dnase2bQ9QY48 354 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Vwa8Q8CC88 1905 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr1274-psA0A1L1SQ02 309 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm12887B1AVM1 119 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 C1ql2Q8CFR0 287 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Zfp111Q9R164 701 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 RhobP62746 196 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 H2-T22Q31615 379 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Tff3Q62395 81 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Vmn1r62Q8R2C0 300 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Heatr5bQ8C547 2070 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm4565A0A140LJ87 301 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr789A0A1L1SV77 312 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 A0A286YDM5 308 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm14412A2ARR7 526 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr196E9PYP4 309 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Zfp493E9Q1L8 384 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm6176J3QK59 301 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Wnt2bO70283 389 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Hoxb1P17919 297 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Reg2Q08731 173 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm4567Q3UTA8 301 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr138Q7TRI7 312 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Zfp729bQ80VN4 1045 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Wdyhv1Q80WB5 209 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr303Q8VFP0 319 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Tctex1d1Q9D5I4 173 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr1264Q9R0K2 308 aa13.44□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 1700025B11RikA0A087WNZ6 93 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm10428J3QNV7 132 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 BatfO35284 125 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm1673Q3UR78 90 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Obox7Q4KL20 218 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Usf1Q61069 310 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Ifna13Q80SU4 189 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Sh3bgrl2Q8BG73 107 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr1342Q8VFY3 315 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gar1Q9CY66 231 aaKnown RBP13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm45736A0A1B0GS18 427 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm2026A2ART4 498 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Ccr6O54689 367 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Rasl10bQ5SSG5 203 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr480Q8VEZ0 312 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr181Q8VGQ7 317 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Il25Q8VHH8 169 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Rnf2Q9CQJ4 336 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Mlf1Q9QWV4 267 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Pkd1l3Q2EG98 2201 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gfra3O35118 397 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Ifna12Q80SS5 189 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gltpd2Q8K0R6 321 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Sval2Q99N75 144 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 SmpxQ9DC77 85 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm39566A0A1B0GT45 1251 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm21746J3QMM6 180 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Phxr2P15972 65 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Fam220aQ3ZN08 260 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Spcs3Q6ZWQ7 180 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Scgb2b24Q7M747 112 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr507Q8VG13 316 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr136Q8VG72 312 aa13.43□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Vmn1r224E9PWK2 298 aa13.42□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Ccdc188F6WEU2 249 aa13.42□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Gm8653K9J7G2 307 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 103.9 ms