RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 AP2S1P53680 142 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-219ENST00000639738 RPL15P61313 204 aaKnown RBP16.3■□□□□ 0.2
SCARB2-219ENST00000639738 Q6ZSV7 163 aa16.3■□□□□ 0.2
SCARB2-219ENST00000639738 OR5T1Q8NG75 326 aa16.3■□□□□ 0.2
SCARB2-219ENST00000639738 TAF15Q92804 592 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCARB2-219ENST00000639738 CYTL1Q9NRR1 136 aa16.3■□□□□ 0.2
SCARB2-219ENST00000639738 IGLV11-55A0A075B6I3 123 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 AP4M1O00189 453 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 NUP62P37198 522 aaPredicted RBP16.29■□□□□ 0.2
SCARB2-219ENST00000639738 ECSCRQ19T08 205 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 ETV3LQ6ZN32 361 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 SERTAD4Q9NUC0 356 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 FBXL17Q9UF56 701 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 OR8U8P0C7N1 319 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 S100A11P31949 105 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 SUB1P53999 127 aaKnown RBP eCLIP16.29■□□□□ 0.23e-7■■■□□ 19
SCARB2-219ENST00000639738 MLANAQ16655 118 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 STX12Q86Y82 276 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 JMJD8Q96S16 334 aa16.29■□□□□ 0.2
SCARB2-219ENST00000639738 FNDC4Q9H6D8 234 aaPredicted RBP16.29■□□□□ 0.2
SCARB2-219ENST00000639738 ATRQ13535 2644 aa16.28■□□□□ 0.2
SCARB2-219ENST00000639738 BRI3O95415 125 aa16.28■□□□□ 0.2
SCARB2-219ENST00000639738 PRH1P02810 166 aa16.28■□□□□ 0.2
SCARB2-219ENST00000639738 RAB11AP62491 216 aa16.28■□□□□ 0.2
SCARB2-219ENST00000639738 OR8G2PQ6IF36 304 aa16.28■□□□□ 0.2
SCARB2-219ENST00000639738 TMEM217Q8N7C4 229 aa16.28■□□□□ 0.2
SCARB2-219ENST00000639738 OR5C1Q8NGR4 320 aa16.28■□□□□ 0.2
SCARB2-219ENST00000639738 RNASEH2CQ8TDP1 164 aaKnown RBP16.28■□□□□ 0.2
SCARB2-219ENST00000639738 MDFIQ99750 246 aa16.28■□□□□ 0.2
SCARB2-219ENST00000639738 TRBV9A0A0B4J1U6 114 aa16.27■□□□□ 0.2
SCARB2-219ENST00000639738 IGLV1-40P01703 118 aa16.27■□□□□ 0.2
SCARB2-219ENST00000639738 VWC2Q2TAL6 325 aa16.27■□□□□ 0.2
SCARB2-219ENST00000639738 OR10P1Q8NGE3 313 aa16.27■□□□□ 0.2
SCARB2-219ENST00000639738 ARL6Q9H0F7 186 aa16.27■□□□□ 0.2
SCARB2-219ENST00000639738 PAIP2BQ9ULR5 123 aaKnown RBP16.27■□□□□ 0.2
SCARB2-219ENST00000639738 I3L2K1 104 aa16.26■□□□□ 0.19
SCARB2-219ENST00000639738 TCF21O43680 179 aa16.26■□□□□ 0.19
SCARB2-219ENST00000639738 IFNA4P05014 189 aa16.26■□□□□ 0.19
SCARB2-219ENST00000639738 MDKP21741 143 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-219ENST00000639738 CD69Q07108 199 aa16.26■□□□□ 0.19
SCARB2-219ENST00000639738 SLC38A11Q08AI6 406 aa16.26■□□□□ 0.19
SCARB2-219ENST00000639738 OR1L6Q8NGR2 347 aa16.26■□□□□ 0.19
SCARB2-219ENST00000639738 SMIM3Q9BZL3 60 aa16.26■□□□□ 0.19
SCARB2-219ENST00000639738 COL6A5A8TX70 2615 aa16.26■□□□□ 0.19
SCARB2-219ENST00000639738 K7EIM0 57 aa16.25■□□□□ 0.19
SCARB2-219ENST00000639738 BCL2L11O43521 198 aa16.25■□□□□ 0.19
SCARB2-219ENST00000639738 SCAF4O95104 1147 aaKnown RBP16.25■□□□□ 0.19
SCARB2-219ENST00000639738 OPCMLQ14982 345 aa16.25■□□□□ 0.19
SCARB2-219ENST00000639738 ARSJQ5FYB0 599 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-219ENST00000639738 SLC25A24Q6NUK1 477 aa16.25■□□□□ 0.19
SCARB2-219ENST00000639738 OR1S2Q8NGQ3 325 aa16.25■□□□□ 0.19
SCARB2-219ENST00000639738 GGACTQ9BVM4 153 aa16.25■□□□□ 0.19
SCARB2-219ENST00000639738 C16orf95Q9H693 158 aa16.25■□□□□ 0.19
SCARB2-219ENST00000639738 ZC4H2Q9NQZ6 224 aa16.25■□□□□ 0.19
SCARB2-219ENST00000639738 MRPL36Q9P0J6 103 aaKnown RBP16.25■□□□□ 0.19
SCARB2-219ENST00000639738 GPX4P36969 197 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-219ENST00000639738 DLK1P80370 383 aa16.24■□□□□ 0.19
SCARB2-219ENST00000639738 ARPC5LQ9BPX5 153 aa16.24■□□□□ 0.19
SCARB2-219ENST00000639738 TAAR5O14804 337 aa16.24■□□□□ 0.19
SCARB2-219ENST00000639738 HBG1P69891 147 aa16.24■□□□□ 0.19
SCARB2-219ENST00000639738 HBG2P69892 147 aa16.24■□□□□ 0.19
SCARB2-219ENST00000639738 CLINT1Q14677 625 aa16.24■□□□□ 0.19
SCARB2-219ENST00000639738 ATP6V1FQ16864 119 aa16.24■□□□□ 0.19
SCARB2-219ENST00000639738 WIPF2Q8TF74 440 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-219ENST00000639738 CACNG8Q8WXS5 425 aa16.24■□□□□ 0.19
SCARB2-219ENST00000639738 PINX1Q96BK5 328 aaKnown RBP16.24■□□□□ 0.19
SCARB2-219ENST00000639738 FNDC10F2Z333 226 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 CORTO00230 105 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 NDUFB8O95169 186 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 IGHG4P01861 327 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 DEFA4P12838 97 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 SRSF2Q01130 221 aaKnown RBP16.23■□□□□ 0.19
SCARB2-219ENST00000639738 GAMTQ14353 236 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 RPL7L1Q6DKI1 246 aaKnown RBP16.23■□□□□ 0.19
SCARB2-219ENST00000639738 C10orf99Q6UWK7 81 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 MISP3Q96FF7 219 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 ATP5SQ99766 215 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 ARV1Q9H2C2 271 aa16.23■□□□□ 0.19
SCARB2-219ENST00000639738 H3BUA1 57 aa16.22■□□□□ 0.19
SCARB2-219ENST00000639738 NDUFA7O95182 113 aa16.22■□□□□ 0.19
SCARB2-219ENST00000639738 MT-CO2P00403 227 aa16.22■□□□□ 0.19
SCARB2-219ENST00000639738 OR2T6Q8NHC8 308 aa16.22■□□□□ 0.19
SCARB2-219ENST00000639738 HIST1H1BP16401 226 aaKnown RBP16.21■□□□□ 0.19
SCARB2-219ENST00000639738 EXOSC2Q13868 293 aaKnown RBP16.21■□□□□ 0.19
SCARB2-219ENST00000639738 SLC16A13Q7RTY0 426 aa16.21■□□□□ 0.19
SCARB2-219ENST00000639738 TMEM147Q9BVK8 224 aa16.21■□□□□ 0.19
SCARB2-219ENST00000639738 KLK15Q9H2R5 256 aa16.21■□□□□ 0.19
SCARB2-219ENST00000639738 KANTRA0A1W2PQU2 76 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 TMEM89A2RUT3 159 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 OR2J3O76001 311 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 IGHV3-48P01763 117 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 PSMB8P28062 276 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 DEFA5Q01523 94 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 KIAA0141Q14154 515 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-219ENST00000639738 ZNF329Q86UD4 541 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 UBAC2Q8NBM4 344 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 LINC01006Q8NI28 216 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 SCARB1Q8WTV0 552 aa16.2■□□□□ 0.18
SCARB2-219ENST00000639738 PARD6GQ9BYG4 376 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-219ENST00000639738 UQCC1Q9NVA1 299 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms