RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 TIMM23O14925 209 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 HMGB3O15347 200 aaKnown RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 NDUFS7O75251 213 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 ACTL6BO94805 426 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 NDUFA3O95167 84 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 VENTXO95231 258 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 OR2C1O95371 312 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 MT-CO2P00403 227 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 MOSP00540 346 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 CRYBA1P05813 215 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 OR5G3P0C626 314 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 AREGP15514 252 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 NPPCP23582 126 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 ZFP36P26651 326 aaKnown RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 CNTFRP26992 372 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 GCHFRP30047 84 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 AKR1C3P42330 323 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 RND2P52198 227 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 DLX1P56177 255 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 AKIRIN2Q53H80 203 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 CCDC144NLQ6NUI1 221 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 SPNS3Q6ZMD2 512 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 CYP2G1PQ6ZSU1 146 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 SLC16A13Q7RTY0 426 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 C1QL4Q86Z23 238 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 OR1L6Q8NGR2 347 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 OR2T10Q8NGZ9 312 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 OR1P1Q8NH06 330 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 OR4F5Q8NH21 305 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 OR2T6Q8NHC8 308 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 GATAD1Q8WUU5 269 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 SSMEM1Q8WWF3 244 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 OR4F4Q96R69 305 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 C20orf24Q9BUV8 137 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 MRPL32Q9BYC8 188 aaKnown RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 SIRPDQ9H106 197 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 FNDC4Q9H6D8 234 aaPredicted RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 DNAJC4Q9NNZ3 241 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 TPSG1Q9NRR2 321 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 TMEM167BQ9NRX6 74 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 TECRQ9NZ01 308 aaKnown RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 DOK5Q9P104 306 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 METTL1Q9UBP6 276 aaKnown RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 TBL2Q9Y4P3 447 aaKnown RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 KLF2Q9Y5W3 355 aaPredicted RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 HRNRQ86YZ3 2850 aaPredicted RBP4.45□□□□□ -1.7
NEK3-211ENST00000629912 IGKV1D-37A0A075B6S9 117 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 IGHV2-70DA0A0C4DH43 119 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 TCRBV4S1A1TA0A5B7 111 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 C11orf94C9JXX5 98 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 CLDN34H7C241 214 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 FCN1O00602 326 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 FOXH1O75593 365 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 EIF3GO75821 320 aaKnown RBP eCLIP4.44□□□□□ -1.7
NEK3-211ENST00000629912 ARL14EPLP0DKL9 152 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 C8orf88P0DMB2 117 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 RAB5AP20339 215 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 PDLIM4P50479 330 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 UBE2E1P51965 193 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 CEBPGP53567 150 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 MFAP2P55001 183 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 TAS2R45P59539 299 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 SSBP2P81877 361 aaPredicted RBP4.44□□□□□ -1.7
NEK3-211ENST00000629912 TNXAQ16473 311 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 C10orf55Q5SWW7 151 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 FAM78BQ5VT40 261 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 SPATA31B1PQ5VZV4 182 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 PQLC2Q6ZP29 291 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 VMO1Q7Z5L0 202 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 FAM24BQ8N5W8 94 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 Q8N6K4 173 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 TMEM116Q8NCL8 245 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 OR1L4Q8NGR5 311 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 NPIPB3Q92617 1050 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 EAF1Q96JC9 268 aaPredicted RBP4.44□□□□□ -1.7
NEK3-211ENST00000629912 TRGV9Q99603 122 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 SSX3Q99909 188 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 SMIM7Q9BQ49 75 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 SLC25A33Q9BSK2 321 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 FBXL15Q9H469 300 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 SEPSECSQ9HD40 501 aaKnown RBP4.44□□□□□ -1.7
NEK3-211ENST00000629912 MLXQ9UH92 298 aa4.44□□□□□ -1.7
NEK3-211ENST00000629912 F11RQ9Y624 299 aaKnown RBP4.44□□□□□ -1.7
NEK3-211ENST00000629912 DCHS2Q6V1P9 2916 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 ELOA3CA0A087WX78 387 aaPredicted RBP4.43□□□□□ -1.7
NEK3-211ENST00000629912 A0A1W2PRE2 83 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 C1orf196B1AJZ1 125 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 NDUFS8O00217 210 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 NBR2O15453 112 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 TGOLN2O43493 480 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 TOX4O94842 621 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 IGHV4-39P01824 125 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 PFN1P07737 140 aaKnown RBP4.43□□□□□ -1.7
NEK3-211ENST00000629912 DEFA4P12838 97 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 PAX1P15863 534 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 HOXB4P17483 251 aaPredicted RBP4.43□□□□□ -1.7
NEK3-211ENST00000629912 CTRB1P17538 263 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 LGALS4P56470 323 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 PLP1P60201 277 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 RAB5BP61020 215 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 293.8 ms