RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ZNF497Q6ZNH5 498 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 Q6ZRG5 221 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 HAPLN4Q86UW8 402 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 LGI3Q8N145 548 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 CT45A3Q8NHU0 189 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 TMEM56Q96MV1 263 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 TP53RKQ96S44 253 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 SPATA25Q9BR10 227 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 KIAA1456Q9P272 454 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 RCL1Q9Y2P8 373 aaKnown RBP6.02□□□□□ -1.45
CLK1-215ENST00000621181 LSM5Q9Y4Y9 91 aaKnown RBP6.02□□□□□ -1.45
CLK1-215ENST00000621181 TMEM56-RWDD3S4R434 201 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 A0A1B0GW64 132 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 C12orf77C9JDV5 145 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 H7C2Y5 167 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 MPPED1O15442 326 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 PPYP01298 95 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 HBZP02008 142 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 CNTFRP26992 372 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 SNCAP37840 140 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 HOXA1P49639 335 aaPredicted RBP6.02□□□□□ -1.45
CLK1-215ENST00000621181 SMCO1Q147U7 214 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 C5orf64Q2M2E5 130 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 TMEM30BQ3MIR4 351 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 PHLDA2Q53GA4 152 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 ODF3L1Q8IXM7 274 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 ZNF439Q8NDP4 499 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 ABHD5Q8WTS1 349 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 FLYWCH2Q96CP2 140 aaKnown RBP6.02□□□□□ -1.45
CLK1-215ENST00000621181 ELOVL1Q9BW60 279 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 SMIM3Q9BZL3 60 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 TMEM222Q9H0R3 208 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 Q9N2K0 584 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 FOXA2Q9Y261 457 aaPredicted RBP6.02□□□□□ -1.45
CLK1-215ENST00000621181 TMED3Q9Y3Q3 217 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 TRBV6-6A0A0A6YYG2 114 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 IGKV1-6A0A0C4DH72 117 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 A8MZ25 164 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 TRDCB7Z8K6 153 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 ST8SIA3O43173 380 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 SOX15O60248 233 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 DIRAS3O95661 229 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 CDS2O95674 445 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 IGHV3-11P01762 117 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 PVALBP20472 110 aaPredicted RBP6.01□□□□□ -1.45
CLK1-215ENST00000621181 FXYD4P59646 89 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 PLGLAQ15195 96 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 IGSF11Q5DX21 431 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 NMSQ5H8A3 153 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 ZNF880Q6PDB4 577 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 C5orf24Q7Z6I8 188 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 SELENOHQ8IZQ5 122 aaKnown RBP6.01□□□□□ -1.45
CLK1-215ENST00000621181 Q8N1Y9 231 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 OR1L1Q8NH94 360 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 RXFP4Q8TDU9 374 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 RITA1Q96K30 269 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 ABHD14AQ9BUJ0 271 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 MRPL20Q9BYC9 149 aaKnown RBP6.01□□□□□ -1.45
CLK1-215ENST00000621181 SPACA1Q9HBV2 294 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 FAM212BQ9NTI7 297 aaPredicted RBP6.01□□□□□ -1.45
CLK1-215ENST00000621181 C19orf73Q9NVV2 129 aa6.01□□□□□ -1.45
CLK1-215ENST00000621181 HSPB1P04792 205 aaKnown RBP6□□□□□ -1.45
CLK1-215ENST00000621181 RAB5CP51148 216 aa6□□□□□ -1.45
CLK1-215ENST00000621181 TPPP2P59282 170 aa6□□□□□ -1.45
CLK1-215ENST00000621181 NDPQ00604 133 aa6□□□□□ -1.45
CLK1-215ENST00000621181 NHLH2Q02577 135 aa6□□□□□ -1.45
CLK1-215ENST00000621181 TMEM267Q0VDI3 215 aaPredicted RBP6□□□□□ -1.45
CLK1-215ENST00000621181 MORN2Q502X0 79 aa6□□□□□ -1.45
CLK1-215ENST00000621181 TRAT1Q6PIZ9 186 aa6□□□□□ -1.45
CLK1-215ENST00000621181 TCTEX1D1Q8N7M0 179 aa6□□□□□ -1.45
CLK1-215ENST00000621181 SLC35G3Q8N808 338 aa6□□□□□ -1.45
CLK1-215ENST00000621181 CCDC71LQ8N9Z2 235 aa6□□□□□ -1.45
CLK1-215ENST00000621181 ABHD14BQ96IU4 210 aa6□□□□□ -1.45
CLK1-215ENST00000621181 HIPK2Q9H2X6 1198 aa6□□□□□ -1.45
CLK1-215ENST00000621181 TUBA4BQ9H853 241 aa6□□□□□ -1.45
CLK1-215ENST00000621181 TPSG1Q9NRR2 321 aa6□□□□□ -1.45
CLK1-215ENST00000621181 COA4Q9NYJ1 87 aa6□□□□□ -1.45
CLK1-215ENST00000621181 RNF150Q9ULK6 438 aa6□□□□□ -1.45
CLK1-215ENST00000621181 BORCS7-ASMTA0A0B4J1R7 106 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 IGKV1D-13A0A0B4J2D9 117 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 C3orf85A0A1B0GTC6 90 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 IGSF23A1L1A6 192 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 AGPAT2O15120 278 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 TMEM50AO95807 157 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 SCGB1D2O95969 90 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 IGLV1-51P01701 117 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 IGKV1-13P0DP09 117 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 UCP1P25874 307 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 FHITP49789 147 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 HERV-K104P61576 105 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 CX3CL1P78423 397 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 SRPXP78539 464 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 EWSR1Q01844 656 aaKnown RBP eCLIP5.99□□□□□ -1.45
CLK1-215ENST00000621181 ID3Q02535 119 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 HMGN3Q15651 99 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 HAGHQ16775 308 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 GTSCR1Q86UQ5 136 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 IQCF2Q8IXL9 164 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 NPBQ8NG41 125 aa5.99□□□□□ -1.45
CLK1-215ENST00000621181 IL17DQ8TAD2 202 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms