RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 IFNA17P01571 189 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 S100A5P33763 92 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 ETV6P41212 452 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 ELLP55199 621 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 PVRIGQ6DKI7 326 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 GTSCR1Q86UQ5 136 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 FAM219AQ8IW50 185 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 UBAC2Q8NBM4 344 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 TMEM190Q8WZ59 177 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 WDR89Q96FK6 387 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 GALNT14Q96FL9 552 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 WWC2-AS2Q96NR7 200 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 PALMDQ9NP74 551 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 TMEM56-RWDD3S4R434 201 aa13.92□□□□□ -0.18
SHKBP1-202ENST00000593764 MT-CO2P00403 227 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 IGHV3-48P01763 117 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 FCGR2BP31994 310 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 SUPT4H1P63272 117 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 TMEM187Q14656 261 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 Q56UQ5 140 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 TMEM268Q5VZI3 342 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 TMEM61Q8N0U2 210 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 SLC35G3Q8N808 338 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 GPR146Q96CH1 333 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 SCGB3A2Q96PL1 93 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 MRPL27Q9P0M9 148 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 UFC1Q9Y3C8 167 aa13.91□□□□□ -0.18
SHKBP1-202ENST00000593764 NDUFA4O00483 81 aa13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 CD7P09564 240 aa13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 MFAP4P55083 255 aa13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 ZNF57Q68EA5 555 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 TOMM5Q8N4H5 51 aa13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 RNASE11Q8TAA1 199 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 MARC2Q969Z3 335 aa13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 TXN2Q99757 166 aa13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 PRR13Q9NZ81 148 aa13.9□□□□□ -0.18
SHKBP1-202ENST00000593764 RNASE2P10153 161 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 SNCAP37840 140 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 AP3S2P59780 193 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 CD81P60033 236 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 SPCS3P61009 180 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 GUCA2BQ16661 112 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 BTNL8Q6UX41 500 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 OR52E5Q8NH55 327 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 PINX1Q96BK5 328 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 NEURL2Q9BR09 285 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 PDCD10Q9BUL8 212 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 GAR1Q9NY12 217 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 CACNG5Q9UF02 275 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 KCNIP3Q9Y2W7 256 aa13.89□□□□□ -0.19
SHKBP1-202ENST00000593764 DNAH7Q8WXX0 4024 aa13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 IGHV3OR16-8A0A075B7F1 116 aa13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 AKR1C4P17516 323 aa13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 FAUP35544 74 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 HOXA1P49639 335 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 BSXQ3C1V8 233 aa13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 IL22RA2Q969J5 263 aa13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 TM2D3Q9BRN9 247 aa13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 SRRQ9GZT4 340 aa13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 DAZ1Q9NQZ3 744 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-202ENST00000593764 NBEAL2Q6ZNJ1 2754 aa13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 K7EMT4 169 aa13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 NUPL2O15504 423 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 SPANXN2Q5MJ10 180 aa13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 LINC00322Q6ZN03 302 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 DEDD2Q8WXF8 326 aa13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 RCHY1Q96PM5 261 aa13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 WFDC10AQ9H1F0 79 aa13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 TUBA4BQ9H853 241 aa13.87□□□□□ -0.19
SHKBP1-202ENST00000593764 ZNF207O43670 478 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 SCAF4O95104 1147 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 SUB1P53999 127 aaKnown RBP eCLIP13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 MLANAQ16655 118 aa13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 HAGHQ16775 308 aa13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 DEFB125Q8N687 156 aa13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 C20orf24Q9BUV8 137 aa13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 FNDC4Q9H6D8 234 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 ENY2Q9NPA8 101 aa13.86□□□□□ -0.19
SHKBP1-202ENST00000593764 TRAV25A0A0B4J276 109 aa13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 A0A0B4J2A0 478 aa13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 C15orf62A8K5M9 175 aa13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 RELQ04864 619 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 BAK1Q16611 211 aa13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 NMSQ5H8A3 153 aa13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 LYZL2Q7Z4W2 148 aa13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 OR10C1Q96KK4 312 aa13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 MRPL36Q9P0J6 103 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 SHPKQ9UHJ6 478 aa13.85□□□□□ -0.19
SHKBP1-202ENST00000593764 OR11H12B2RN74 326 aa13.84□□□□□ -0.19
SHKBP1-202ENST00000593764 CORTO00230 105 aa13.84□□□□□ -0.19
SHKBP1-202ENST00000593764 GNG7O60262 68 aa13.84□□□□□ -0.19
SHKBP1-202ENST00000593764 DUSP18Q8NEJ0 188 aa13.84□□□□□ -0.19
SHKBP1-202ENST00000593764 SDHCQ99643 169 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-202ENST00000593764 SLC25A21Q9BQT8 299 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-202ENST00000593764 ZMAT4Q9H898 229 aa13.84□□□□□ -0.19
SHKBP1-202ENST00000593764 RBMY1BA6NDE4 496 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-202ENST00000593764 RBMY1EA6NEQ0 496 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-202ENST00000593764 TMEM50AO95807 157 aa13.83□□□□□ -0.2
SHKBP1-202ENST00000593764 RBMY1DP0C7P1 496 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms