RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 EVC2Q86UK5 1308 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 C2orf70A6NJV1 201 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 MED21Q13503 144 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 LRRN1Q6UXK5 716 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 FAM9CQ8IZT9 166 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 PIGXQ8TBF5 258 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 WDR61Q9GZS3 305 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 CMTM6Q9NX76 183 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 RYR3Q15413 4870 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 CEP192Q8TEP8 1941 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 MAST4O15021 2626 aa0.5□□□□□ -2.33
SMCHD1-207ENST00000581711 ITPR3Q14573 2671 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 TNRC6AQ8NDV7 1962 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 FUOMA2VDF0 154 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 IGKV1-5P01602 117 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 HTR1AP08908 422 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 STX5Q13190 355 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 C1orf158Q8N1D5 194 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 LINC00311Q8N616 119 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 PFN4Q8NHR9 129 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 FGFR1OP2Q9NVK5 253 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 CKLFQ9UBR5 152 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 KLK9Q9UKQ9 250 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 ZNF292O60281 2723 aa0.49□□□□□ -2.33
SMCHD1-207ENST00000581711 DCCP43146 1447 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 PIK3R4Q99570 1358 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 MYO18BQ8IUG5 2567 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 A0A0A6YYH2 397 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 TRAV1-1A0A0B4J248 108 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 A6NJ64 397 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 CETN3O15182 167 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 APOEP02649 317 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 TPM3P06753 285 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 UCHL3P15374 230 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 TPM4P67936 248 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 FAM151BQ6UXP7 276 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 CLVS1Q8IUQ0 354 aaPredicted RBP0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 GPR32P1Q8NGA4 272 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 DRC3Q9H069 523 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 KIF13BQ9NQT8 1826 aa0.48□□□□□ -2.33
SMCHD1-207ENST00000581711 HYDINQ4G0P3 5121 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 OCM2P0CE71 109 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 MYL12AP19105 171 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST1H2BOP23527 126 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST1H2BBP33778 126 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 MAGEA2P43356 314 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 TCL1AP56279 114 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST1H2BDP58876 126 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST1H2BCP62807 126 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST2H2BEQ16778 126 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 OGFRL1Q5TC84 451 aaPredicted RBP0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 LPCAT4Q643R3 524 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 ALKAL1Q6UXT8 129 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 Q6ZS49 121 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 OOSP2Q86WS3 158 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 IQCF2Q8IXL9 164 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 Q8N814 137 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 OR4D11Q8NGI4 311 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST1H2BHQ93079 126 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 SCGB3A1Q96QR1 104 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST1H2BNQ99877 126 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 HIST1H2BMQ99879 126 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 GINS4Q9BRT9 223 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 NKIRAS1Q9NYS0 192 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 USE1Q9NZ43 259 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 MAP1BP46821 2468 aaKnown RBP0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 RIF1Q5UIP0 2472 aaKnown RBP0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 CCDC168Q8NDH2 2452 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 NBEAL2Q6ZNJ1 2754 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 NAV3Q8IVL0 2385 aa0.47□□□□□ -2.33
SMCHD1-207ENST00000581711 EPG5Q9HCE0 2579 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 LRRN3E7EW58 273 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 SLC16A4O15374 487 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 OR2T1O43869 369 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 OR1I1O60431 355 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 DEXIO95424 95 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 IFITM2Q01629 132 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 PMAIP1Q13794 54 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 KCNJ8Q15842 424 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 Q8N6K4 173 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 MCFD2Q8NI22 146 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 LINC00526Q96FQ7 95 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 LLPHQ9BRT6 129 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 ATP6V1DQ9Y5K8 247 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 STAB2Q8WWQ8 2551 aa0.46□□□□□ -2.34
SMCHD1-207ENST00000581711 TENM4Q6N022 2769 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 LRRK2Q5S007 2527 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 A0A1B0GV50 99 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 HYPMO75409 117 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 SSR2P43308 183 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 PDE6HQ13956 83 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 COTL1Q14019 142 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 RNASE10Q5GAN6 216 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 RPL22L1Q6P5R6 122 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 SBSPONQ8IVN8 264 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 MRPL30Q8TCC3 161 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 ZNF418Q8TF45 676 aaPredicted RBP0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 DNAJC9Q8WXX5 260 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms