RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 PCBD2Q9H0N5 130 aa4.04□□□□□ -1.76
CALCOCO2-226ENST00000575461 SH3BGRL3Q9H299 93 aa4.04□□□□□ -1.76
CALCOCO2-226ENST00000575461 LYRM2Q9NU23 88 aaPredicted RBP4.04□□□□□ -1.76
CALCOCO2-226ENST00000575461 ERGIC3Q9Y282 383 aa4.04□□□□□ -1.76
CALCOCO2-226ENST00000575461 UFC1Q9Y3C8 167 aa4.04□□□□□ -1.76
CALCOCO2-226ENST00000575461 WDR90Q96KV7 1748 aa4.04□□□□□ -1.76
CALCOCO2-226ENST00000575461 IGHV1-18A0A0C4DH31 117 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 TRAPPC2LH3BP13 241 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 C19orf84I3L1E1 186 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 AIPO00170 330 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 CIAO1O76071 339 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 PPBPP02775 128 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 ATP5G3P48201 142 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 RHOBP62745 196 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 SS18Q15532 418 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 TSNQ15631 228 aaKnown RBP4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 LCA10Q71F78 164 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 MIR17HGQ75NE6 70 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 TRAPPC6BQ86SZ2 158 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 OR4X2Q8NGF9 303 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 DOCK3Q8IZD9 2030 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 FMN1Q68DA7 1419 aa4.03□□□□□ -1.76
CALCOCO2-226ENST00000575461 KIF1BO60333 1816 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 PTPRSQ13332 1948 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 PHBP35232 272 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 PIGPP57054 158 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 YPEL3P61236 119 aaPredicted RBP4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 ERHP84090 104 aaKnown RBP4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 KISS1Q15726 138 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 DNAJC9Q8WXX5 260 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 C11orf40Q8WZ69 217 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 IMUPQ9GZP8 106 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 SCN9AQ15858 1988 aa4.02□□□□□ -1.77
CALCOCO2-226ENST00000575461 TOPBP1Q92547 1522 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 KDM5BQ9UGL1 1544 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 TRBV10-2A0A0K0K1G8 114 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 CLDN25C9JDP6 229 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 PPP5D1E7EU14 171 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 SERPINB1P30740 379 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 EIF2B2P49770 351 aaKnown RBP4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 FXYD2P54710 66 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 BRD3OSQ6XYD6 125 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 SMIM15Q7Z3B0 74 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 BPIFA4PQ86YQ2 179 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 TMEM70Q9BUB7 260 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 SYNMO15061 1565 aa4.01□□□□□ -1.77
CALCOCO2-226ENST00000575461 PLXNB1O43157 2135 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 A0A1B0GV72 72 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 RFPL4AA6NLU0 287 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 RFPL4AL1F8VTS6 287 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 H7C1C5 153 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 TMEM258P61165 79 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 LCN6P62502 163 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 GNG5P63218 68 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 SUPT4H1P63272 117 aaKnown RBP4□□□□□ -1.77
CALCOCO2-226ENST00000575461 GRINAQ7Z429 371 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 HIST3H2BBQ8N257 126 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 STX19Q8N4C7 294 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 DOHHQ9BU89 302 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 SS18L2Q9UHA2 77 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 SMPXQ9UHP9 88 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 SSR3Q9UNL2 185 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 SDK2Q58EX2 2172 aa4□□□□□ -1.77
CALCOCO2-226ENST00000575461 RPSAP08865 295 aaKnown RBP3.99□□□□□ -1.77
CALCOCO2-226ENST00000575461 CSRP1P21291 193 aaKnown RBP3.99□□□□□ -1.77
CALCOCO2-226ENST00000575461 CLVS1Q8IUQ0 354 aaPredicted RBP3.99□□□□□ -1.77
CALCOCO2-226ENST00000575461 PFN4Q8NHR9 129 aa3.99□□□□□ -1.77
CALCOCO2-226ENST00000575461 TMEM106AQ96A25 262 aa3.99□□□□□ -1.77
CALCOCO2-226ENST00000575461 PBDC1Q9BVG4 233 aa3.99□□□□□ -1.77
CALCOCO2-226ENST00000575461 ACER3Q9NUN7 267 aa3.99□□□□□ -1.77
CALCOCO2-226ENST00000575461 COL4A4P53420 1690 aaPredicted RBP3.99□□□□□ -1.77
CALCOCO2-226ENST00000575461 SCN10AQ9Y5Y9 1956 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 PBRM1Q86U86 1689 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 TMSB15BA0A087X1C1 80 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 LY6LH3BQJ8 138 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 DEFA4P12838 97 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 IDO1P14902 403 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 RHEBQ15382 184 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 NDUFA5Q16718 116 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 ZNF791Q3KP31 576 aaPredicted RBP3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 FAM27BQ5VT28 67 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 GPER1Q99527 375 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 GINS4Q9BRT9 223 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 MRPL40Q9NQ50 206 aaKnown RBP3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 MED29Q9NX70 200 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 ARHGAP32A7KAX9 2087 aa3.98□□□□□ -1.77
CALCOCO2-226ENST00000575461 H0YJX3 145 aa3.97□□□□□ -1.77
CALCOCO2-226ENST00000575461 C3orf84H3BNL1 204 aa3.97□□□□□ -1.77
CALCOCO2-226ENST00000575461 SCGB2B2Q4G0G5 96 aa3.97□□□□□ -1.77
CALCOCO2-226ENST00000575461 Q6ZTI0 123 aa3.97□□□□□ -1.77
CALCOCO2-226ENST00000575461 TMEM86AQ8N2M4 240 aa3.97□□□□□ -1.77
CALCOCO2-226ENST00000575461 AMMECR1Q9Y4X0 333 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO2-226ENST00000575461 TONSLQ96HA7 1378 aa3.97□□□□□ -1.77
CALCOCO2-226ENST00000575461 LTBP2Q14767 1821 aa3.96□□□□□ -1.78
CALCOCO2-226ENST00000575461 TRGV4A0A0C4DH28 118 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms