RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 K7EIM0 57 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 ZNF701M0R085 212 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 ZNF207O43670 478 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 ATG12O94817 140 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 P0C879 139 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 UCP1P25874 307 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 ELLP55199 621 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 HSPE1P61604 102 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 ERHP84090 104 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 SURF2Q15527 256 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 ANKRD55Q3KP44 614 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 CASC10Q5T4H9 136 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 CCDC190Q86UF4 302 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 OR2C3Q8N628 320 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 OR1P1Q8NH06 330 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 TRIM63Q969Q1 353 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 PINX1Q96BK5 328 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 FAM110AQ9BQ89 295 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 CHRDL1Q9BU40 450 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 PDCD10Q9BUL8 212 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 NAA60Q9H7X0 242 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 DAZ1Q9NQZ3 744 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 RBMY1BA6NDE4 496 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 RBMY1EA6NEQ0 496 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 NDUFA4O00483 81 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 IFNA17P01571 189 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 IGHV3-48P01763 117 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 RBMY1DP0C7P1 496 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 C8orf88P0DMB2 117 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 KLF9Q13886 244 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 ZNF79Q15937 498 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 SLC35G3Q8N808 338 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 LHFPL5Q8TAF8 219 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 GLYATL2Q8WU03 294 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 TMEM222Q9H0R3 208 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 PRR13Q9NZ81 148 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 SCP2D1Q9UJQ7 156 aa9.53□□□□□ -0.88
NPLOC4-213ENST00000573519 TRAV25A0A0B4J276 109 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 CRYM-AS1A6NIL9 109 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 F8W735 103 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 NUPL2O15504 423 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 ST8SIA3O43173 380 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 YIF1AO95070 293 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 MT-CO2P00403 227 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 ADMP35318 185 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 SNCAP37840 140 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 MFAP4P55083 255 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 RELQ04864 619 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 LINC00322Q6ZN03 302 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 Q6ZRM9 215 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 SELENOHQ8IZQ5 122 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 TOMM5Q8N4H5 51 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 ZNF114Q8NC26 417 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 TMEM230Q96A57 120 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 RRNAD1Q96FB5 475 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 ATP6V0BQ99437 205 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 HIPK2Q9H2X6 1198 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 EDA2RQ9HAV5 297 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 GAR1Q9NY12 217 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 NBEAL2Q6ZNJ1 2754 aa9.52□□□□□ -0.89
NPLOC4-213ENST00000573519 I3L2K1 104 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 GNG7O60262 68 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 CDS2O95674 445 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 CTSGP08311 255 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 AKR1C4P17516 323 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 ETV6P41212 452 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 HOXA1P49639 335 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 LAMTOR1Q6IAA8 161 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 ENY2Q9NPA8 101 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 UBQLN2Q9UHD9 624 aa9.51□□□□□ -0.89
NPLOC4-213ENST00000573519 STAB2Q8WWQ8 2551 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 B3GALNT1O75752 331 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 FAUP35544 74 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 AP3S2P59780 193 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 DHODHQ02127 395 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 TMEM187Q14656 261 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 SPANXN2Q5MJ10 180 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 TMEM268Q5VZI3 342 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 RBPMSQ93062 196 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 GPR146Q96CH1 333 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 SCGB3A2Q96PL1 93 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 TXN2Q99757 166 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 SPAG8Q99932 426 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 SRRQ9GZT4 340 aa9.5□□□□□ -0.89
NPLOC4-213ENST00000573519 LOC102724200A0A096LPH7 203 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 IGHV3-49A0A0A0MS15 119 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 C15orf62A8K5M9 175 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 K7EMT4 169 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 TSPAN4O14817 238 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 SUB1P53999 127 aaKnown RBP eCLIP9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 TMED4Q7Z7H5 227 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 DUSP18Q8NEJ0 188 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 GGTLC1Q9BX51 225 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 CACNG5Q9UF02 275 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 KCNIP3Q9Y2W7 256 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 DNAH7Q8WXX0 4024 aa9.49□□□□□ -0.89
NPLOC4-213ENST00000573519 LINC00854A0A1B0GVQ3 168 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 NXPH3O95157 252 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 NPBWR1P48145 328 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms