RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 MED28Q9H204 178 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 MGAT4CQ9UBM8 478 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 S4R3C0 116 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 U3KQ87 197 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 IGHV3-21A0A0B4J1V1 117 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 CCL24O00175 119 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 SSSCA1O60232 199 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 IGHV3-23P01764 117 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 HSPB1P04792 205 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 MYCNOSP40205 109 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 RUNX1Q01196 453 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 KLK9Q2XQG4 91 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 FAM209BQ5JX69 171 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 DUX3Q96PT4 197 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 KLK9Q9UKQ9 250 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 LSM5Q9Y4Y9 91 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
NPLOC4-209ENST00000572760 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 I3L521 148 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 L7N2F9 121 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 TSPAN15O95858 294 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 IFNA4P05014 189 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 OPRK1P41145 380 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 ATP5IP56385 69 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 S100A10P60903 97 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 RAB11AP62491 216 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 VAMP2P63027 116 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 CYCSP99999 105 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 SPANXN5Q5MJ07 72 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 C11orf87Q6NUJ2 197 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 ZNF343Q6P1L6 599 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 VN1R17PQ8TDU5 208 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 RAX2Q96IS3 184 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 RANGRFQ9HD47 186 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
NPLOC4-209ENST00000572760 RPS10-NUDT3A0A1W2PQS6 291 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 MFSD2BA6NFX1 497 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 LINC01619G3V211 115 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 MT-CO2P00403 227 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 OR8U8P0C7N1 319 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 PVALBP20472 110 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 ZNF616Q08AN1 781 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 BSXQ3C1V8 233 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 Q56UQ5 140 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 SCARB1Q8WTV0 552 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 RAB40CQ96S21 281 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 C21orf62Q9NYP8 219 aa11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 RCL1Q9Y2P8 373 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-209ENST00000572760 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 A0A087WW49 117 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 H3BP45 60 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 K7EIM0 57 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 ZP3P21754 424 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 MFAP4P55083 255 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 ACSM6Q6P461 480 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 RNASEH2CQ8TDP1 164 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 SMIM8Q96KF7 97 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 NMES1Q9C002 83 aa11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 GAR1Q9NY12 217 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 STRAPQ9Y3F4 350 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-209ENST00000572760 I3L2K1 104 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 K7EPK0 472 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 RLN2P04090 185 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 CLEC3BP05452 202 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 GPR183P32249 361 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 ARL3P36405 182 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 BCAP31P51572 246 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 RAB32Q13637 225 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 FCN2Q15485 313 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 RPEL1Q2QD12 228 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 ETFRF1Q6IPR1 90 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 ETV3LQ6ZN32 361 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 ZNF502Q8TBZ5 544 aa11.2□□□□□ -0.62
NPLOC4-209ENST00000572760 PPP5D1E7EU14 171 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 GNG7O60262 68 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 TRBV12-3P01733 135 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 CD33P20138 364 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 NPBWR1P48145 328 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 TAS2R30P59541 319 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 RRAS2P62070 204 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 LRRC37A5PQ49AS3 106 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
NPLOC4-209ENST00000572760 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
NPLOC4-209ENST00000572760 C15orf62A8K5M9 175 aa11.18□□□□□ -0.62
NPLOC4-209ENST00000572760 TSC22D2O75157 780 aa11.18□□□□□ -0.62
NPLOC4-209ENST00000572760 GGCTO75223 188 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-209ENST00000572760 SCGB2A1O75556 95 aa11.18□□□□□ -0.62
NPLOC4-209ENST00000572760 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-209ENST00000572760 SLURP1P55000 103 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms