RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 ORM1P02763 201 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 COX6A1P12074 109 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 FOXA3P55318 350 aaPredicted RBP-0.93□□□□□ -2.56
CASC4-211ENST00000561305 CLDN12P56749 244 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 FABP9Q0Z7S8 132 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 RNASE10Q5GAN6 216 aaKnown RBP-0.93□□□□□ -2.56
CASC4-211ENST00000561305 C6orf52Q5T4I8 152 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 DNM1P34Q6PK57 102 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 TMEM156Q8N614 296 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 C3orf56Q8N813 242 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 CMTM5Q96DZ9 223 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 SCGB3A1Q96QR1 104 aa-0.93□□□□□ -2.56
CASC4-211ENST00000561305 A0A0D9SG52 128 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 MKRN2OSH3BPM6 223 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 GOLGA8MH3BSY2 632 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 IVLP07476 585 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 KCNE1P15382 129 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 ATOH7Q8N100 152 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 OR4E2Q8NGC2 313 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 TMEM14CQ9P0S9 112 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 HERC1Q15751 4861 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 TOPBP1Q92547 1522 aa-0.94□□□□□ -2.56
CASC4-211ENST00000561305 KMT2CQ8NEZ4 4911 aaKnown RBP-0.94□□□□□ -2.56
CASC4-211ENST00000561305 FLNAP21333 2647 aaKnown RBP-0.95□□□□□ -2.56
CASC4-211ENST00000561305 FAAHO00519 579 aa-0.95□□□□□ -2.56
CASC4-211ENST00000561305 TOX3O15405 576 aaPredicted RBP-0.95□□□□□ -2.56
CASC4-211ENST00000561305 TCL1BO95988 128 aa-0.95□□□□□ -2.56
CASC4-211ENST00000561305 DEFB113Q30KQ7 82 aa-0.95□□□□□ -2.56
CASC4-211ENST00000561305 GLT8D1Q68CQ7 371 aa-0.95□□□□□ -2.56
CASC4-211ENST00000561305 OPTNQ96CV9 577 aa-0.95□□□□□ -2.56
CASC4-211ENST00000561305 DERL1Q9BUN8 251 aa-0.95□□□□□ -2.56
CASC4-211ENST00000561305 TINCRA0A1B0GVN0 87 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 TRBV6-4A0A1B0GX49 114 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 ACOX3O15254 700 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 SULT1B1O43704 296 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 KLF7O75840 302 aaPredicted RBP-0.96□□□□□ -2.56
CASC4-211ENST00000561305 HLA-DRAP01903 254 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 CAV1Q03135 178 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 RHEBQ15382 184 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 AADACL3Q5VUY0 350 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 HIST2H3AQ71DI3 136 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 TSPAN32Q96QS1 320 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 HDHD2Q9H0R4 259 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 FKBP14Q9NWM8 211 aa-0.96□□□□□ -2.56
CASC4-211ENST00000561305 PHRF1Q9P1Y6 1649 aaKnown RBP-0.97□□□□□ -2.56
CASC4-211ENST00000561305 IL3P08700 152 aa-0.97□□□□□ -2.56
CASC4-211ENST00000561305 MAP3K7CLP57077 242 aa-0.97□□□□□ -2.56
CASC4-211ENST00000561305 Q5BKY6 102 aa-0.97□□□□□ -2.56
CASC4-211ENST00000561305 DPPA3Q6W0C5 159 aa-0.97□□□□□ -2.56
CASC4-211ENST00000561305 CRLF3Q8IUI8 442 aa-0.97□□□□□ -2.56
CASC4-211ENST00000561305 OR10J5Q8NHC4 309 aa-0.97□□□□□ -2.56
CASC4-211ENST00000561305 DCSTAMPQ9H295 470 aa-0.97□□□□□ -2.56
CASC4-211ENST00000561305 HS3ST2Q9Y278 367 aa-0.97□□□□□ -2.56
CASC4-211ENST00000561305 MYO18AQ92614 2054 aaKnown RBP-0.97□□□□□ -2.56
CASC4-211ENST00000561305 TLCD2A6NGC4 264 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 REG1AP05451 166 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 RD3LP0DJH9 198 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 MGST1P10620 155 aaKnown RBP-0.98□□□□□ -2.57
CASC4-211ENST00000561305 SPANXN3Q5MJ09 141 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 C10orf99Q6UWK7 81 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 BOD1L2Q8IYS8 172 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 OR5A1Q8NGJ0 315 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 MCFD2Q8NI22 146 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 DHRS9Q9BPW9 319 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 GINS4Q9BRT9 223 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 U3KQA8 63 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 PDZD2O15018 2839 aa-0.98□□□□□ -2.57
CASC4-211ENST00000561305 C10orf142B7Z368 130 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 F8VZ95 297 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 CCL16O15467 120 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 PROSCO94903 275 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 IFITM2Q01629 132 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 FAM74A1Q5RGS3 127 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 CD302Q8IX05 232 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 TMEM161BQ8NDZ6 487 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 POLR1DQ9Y2S0 133 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 ASXL3Q9C0F0 2248 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 TTC28Q96AY4 2481 aa-0.99□□□□□ -2.57
CASC4-211ENST00000561305 ABCA12Q86UK0 2595 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 TET1Q8NFU7 2136 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 KNTC1P50748 2209 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 PCLOQ9Y6V0 5065 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 A0A0J9YY10 115 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 LOC100506127A0A0U1RQW1 187 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 A0A1B0GX78 115 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 OR2B3O76000 313 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 IGKV1-5P01602 117 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 SPINT3P49223 89 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 Q3ZCU0 254 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 KHDC3LQ587J8 217 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 OR51I2Q9H344 312 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 DKKL1Q9UK85 242 aa-1□□□□□ -2.57
CASC4-211ENST00000561305 TRBV20OR9-2A0A075B6H5 130 aa-1.01□□□□□ -2.57
CASC4-211ENST00000561305 CDC34P49427 236 aaPredicted RBP-1.01□□□□□ -2.57
CASC4-211ENST00000561305 NKX2-5P52952 324 aaPredicted RBP-1.01□□□□□ -2.57
CASC4-211ENST00000561305 TNFAIP8L2Q6P589 184 aaPredicted RBP-1.01□□□□□ -2.57
CASC4-211ENST00000561305 MIR17HGQ75NE6 70 aa-1.01□□□□□ -2.57
CASC4-211ENST00000561305 BPIFA4PQ86YQ2 179 aa-1.01□□□□□ -2.57
CASC4-211ENST00000561305 CLVS1Q8IUQ0 354 aaPredicted RBP-1.01□□□□□ -2.57
CASC4-211ENST00000561305 IQCF2Q8IXL9 164 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms