RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 DUX4L9Q6RFH8 374 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 MIR17HGQ75NE6 70 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 LYG1Q8N1E2 194 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 TMEM256Q8N2U0 113 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 OR1L8Q8NGR8 309 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF503Q96F45 646 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 UHRF2Q96PU4 802 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 C19orf24Q9BVV8 132 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 SSBP4Q9BWG4 385 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 ENY2Q9NPA8 101 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 TMEM167BQ9NRX6 74 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 BET1LQ9NYM9 111 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 RPUSD1Q9UJJ7 312 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 V9GYV3 84 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 PKD1L2Q7Z442 2459 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 DSCAMO60469 2012 aa4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 INTS1Q8N201 2190 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-212ENST00000542495 TANC2Q9HCD6 1990 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 IGKV1OR2-108A0A075B7D4 117 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 TRBV9A0A0B4J1U6 114 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 KIR2DL5BA0A0G2JN68 375 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 KIR2DL5BA0A0G2JPC4 375 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 TEX50A0A1B0GTY4 177 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 A0A1B0GV90 55 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 J3QR06 171 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 MMP23AO75900 390 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 OR4A8P0C604 315 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 OR5G3P0C626 314 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 RNASE2P10153 161 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 MYOD1P15172 320 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 COL8A2P25067 703 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 CEACAM8P31997 349 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 TAS2R60P59551 318 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 TNFAIP6P98066 277 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 Q0VG73 95 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 DEFB109BQ30KR1 87 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 C1orf194Q5T5A4 169 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 C1orf185Q5T7R7 199 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 Q6ZS92 163 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF833PQ6ZTB9 187 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 KIR2DL5AQ8N109 375 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 ZADH2Q8N4Q0 377 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 OR4P4Q8NGL7 312 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 OR5B3Q8NH48 314 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 NABP2Q9BQ15 211 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 PLEKHA3Q9HB20 300 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 FKBP11Q9NYL4 201 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 TP53TG5Q9Y2B4 290 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 LAMA5O15230 3695 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 A0A1B0GUS0 222 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 A0A1W2PRE2 83 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 PSMB11A5LHX3 300 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF705GA8MUZ8 300 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 A8MXE2 369 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 SLC17A3O00476 420 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 IGLV2-8P01709 118 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 IGKV1-16P04430 117 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 PAFAH1B2P68402 229 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF90Q03938 601 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 MEF2CQ06413 473 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 RTL8BQ17RB0 113 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 PQLC2Q6ZP29 291 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 RPRMLQ8N4K4 120 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 FAM216BQ8N7L0 139 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 NUP37Q8NFH4 326 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 OR5AN1Q8NGI8 311 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 OSR1Q8TAX0 266 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF596Q8TC21 504 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 CACNG8Q8WXS5 425 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 MISP3Q96FF7 219 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 CCL13Q99616 98 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 GNB1LQ9BYB4 327 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 OSTCQ9NRP0 149 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 NDUFA4L2Q9NRX3 87 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 SLC35D1Q9NTN3 355 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 TECRQ9NZ01 308 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 NAGKQ9UJ70 344 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 LINC00312Q9Y6C7 94 aa4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 RAI1Q7Z5J4 1906 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-212ENST00000542495 ZFYVE26Q68DK2 2539 aa4.21□□□□□ -1.73
ATPAF1-212ENST00000542495 DSPP15924 2871 aaKnown RBP4.21□□□□□ -1.73
ATPAF1-212ENST00000542495 HEATR1Q9H583 2144 aaKnown RBP4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 hADV38S2A0JD32 116 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 HELTA6NFD8 242 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 GGTLC3B5MD39 225 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 ISLRO14498 428 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 SNRPCP09234 159 aaKnown RBP4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 SAA1P0DJI8 122 aaPredicted RBP4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 HNF1AP20823 631 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 CBLN1P23435 193 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 TNFSF4P23510 183 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 CRYBB3P26998 211 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 OR10J1P30954 320 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 GNG4P50150 75 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 GNG10P50151 68 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 TAS2R45P59539 299 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 SELENOVP59797 346 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 ERVFC1-1P60608 527 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 CX3CL1P78423 397 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms