RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 FAM25AB3EWG3 89 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 FAM25CB3EWG5 89 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 FAM25GB3EWG6 89 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 INS-IGF2F8WCM5 200 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 M0QYG6 137 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 LHFPL1Q86WI0 220 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 C15orf40Q8WUR7 153 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 GINS3Q9BRX5 216 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 MAP6D1Q9H9H5 199 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 KLK11Q9UBX7 282 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 BIRC6Q9NR09 4857 aa12.37□□□□□ -0.43
PSMD3-204ENST00000540504 CXorf65A6NEN9 183 aa12.36□□□□□ -0.43
PSMD3-204ENST00000540504 PGAM2P15259 253 aa12.36□□□□□ -0.43
PSMD3-204ENST00000540504 SNCAP37840 140 aa12.36□□□□□ -0.43
PSMD3-204ENST00000540504 NPBWR1P48145 328 aa12.36□□□□□ -0.43
PSMD3-204ENST00000540504 PIGPP57054 158 aa12.36□□□□□ -0.43
PSMD3-204ENST00000540504 TMEM217Q8N7C4 229 aa12.36□□□□□ -0.43
PSMD3-204ENST00000540504 DUSP18Q8NEJ0 188 aa12.36□□□□□ -0.43
PSMD3-204ENST00000540504 PINX1Q96BK5 328 aaKnown RBP12.36□□□□□ -0.43
PSMD3-204ENST00000540504 MTFP1Q9UDX5 166 aa12.36□□□□□ -0.43
PSMD3-204ENST00000540504 CORTO00230 105 aa12.35□□□□□ -0.43
PSMD3-204ENST00000540504 ZNF182P17025 639 aaPredicted RBP12.35□□□□□ -0.43
PSMD3-204ENST00000540504 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
PSMD3-204ENST00000540504 AKR1C2P52895 323 aa12.35□□□□□ -0.43
PSMD3-204ENST00000540504 PAFAH1B2P68402 229 aa12.35□□□□□ -0.43
PSMD3-204ENST00000540504 FAM90A2PQ658T7 463 aa12.35□□□□□ -0.43
PSMD3-204ENST00000540504 ZFAND1Q8TCF1 268 aa12.35□□□□□ -0.43
PSMD3-204ENST00000540504 LINC00476Q8WZB0 136 aa12.35□□□□□ -0.43
PSMD3-204ENST00000540504 C3orf85A0A1B0GTC6 90 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 B3GALNT1O75752 331 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 IGKV1-5P01602 117 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 CD3DP04234 171 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 P0C879 139 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 SUB1P53999 127 aaKnown RBP eCLIP12.34□□□□□ -0.435e-9■■■■■ 49.6
PSMD3-204ENST00000540504 PMS2P11Q13670 270 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 PVRIGQ6DKI7 326 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 ZNF600Q6ZNG1 722 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 APRG1Q8IVJ8 170 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 SLC35G3Q8N808 338 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 CCDC71LQ8N9Z2 235 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 OR52I2Q8NH67 350 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 TP53RKQ96S44 253 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 PDCD10Q9BUL8 212 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 EXTL2Q9UBQ6 330 aa12.34□□□□□ -0.43
PSMD3-204ENST00000540504 A0A0B4J293 547 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 GABARAPO95166 117 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 IFNA17P01571 189 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 IGHV3-48P01763 117 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 PI3P19957 117 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.44
PSMD3-204ENST00000540504 CTF1Q16619 201 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 IZUMO4Q1ZYL8 232 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 CEMP1Q6PRD7 247 aaPredicted RBP12.33□□□□□ -0.44
PSMD3-204ENST00000540504 TOMM20LQ6UXN7 152 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 TERB2Q8NHR7 220 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 GATAD1Q8WUU5 269 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 VSIRQ9H7M9 311 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 COPZ2Q9P299 210 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 KLK5Q9Y337 293 aaPredicted RBP12.33□□□□□ -0.44
PSMD3-204ENST00000540504 ALMS1Q8TCU4 4167 aa12.33□□□□□ -0.44
PSMD3-204ENST00000540504 IGHV3-49A0A0A0MS15 119 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 MPTX1A8MV57 137 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 ST8SIA3O43173 380 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 CD74P04233 296 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 TFPI2P48307 235 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 TAS2R19P59542 299 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 RNASE12Q5GAN4 147 aaKnown RBP12.32□□□□□ -0.44
PSMD3-204ENST00000540504 TCF24Q7RTU0 167 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 TMEM229BQ8NBD8 167 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 RRNAD1Q96FB5 475 aaKnown RBP12.32□□□□□ -0.44
PSMD3-204ENST00000540504 TMEM231Q9H6L2 316 aa12.32□□□□□ -0.44
PSMD3-204ENST00000540504 IGKV3-7A0A075B6H7 116 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 TRAV2A0A0B4J234 112 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 SCGB2A1O75556 95 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 DFFBO76075 338 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 TMEM50AO95807 157 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 UCP1P25874 307 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 PPP5CP53041 499 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 MRPS10P82664 201 aaKnown RBP12.31□□□□□ -0.44
PSMD3-204ENST00000540504 SSBP1Q04837 148 aaKnown RBP12.31□□□□□ -0.44
PSMD3-204ENST00000540504 TRIM16LQ309B1 348 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 SPINK9Q5DT21 86 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 ABHD1Q96SE0 405 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 ZFAND3Q9H8U3 227 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 ENY2Q9NPA8 101 aa12.31□□□□□ -0.44
PSMD3-204ENST00000540504 PUS1Q9Y606 427 aaKnown RBP eCLIP12.31□□□□□ -0.44
PSMD3-204ENST00000540504 IGHV3OR16-13A0A075B7E8 117 aa12.3□□□□□ -0.44
PSMD3-204ENST00000540504 IGHV3-74A0A0B4J1X5 117 aa12.3□□□□□ -0.44
PSMD3-204ENST00000540504 GABARAPH6UMI1 98 aa12.3□□□□□ -0.44
PSMD3-204ENST00000540504 RAB3DO95716 219 aa12.3□□□□□ -0.44
PSMD3-204ENST00000540504 LY6G6CO95867 125 aa12.3□□□□□ -0.44
PSMD3-204ENST00000540504 RNASE2P10153 161 aaKnown RBP12.3□□□□□ -0.44
PSMD3-204ENST00000540504 RPL5P46777 297 aaKnown RBP12.3□□□□□ -0.44
PSMD3-204ENST00000540504 HOXA1P49639 335 aaPredicted RBP12.3□□□□□ -0.44
PSMD3-204ENST00000540504 FAM219AQ8IW50 185 aa12.3□□□□□ -0.44
PSMD3-204ENST00000540504 GBGT1Q8N5D6 347 aa12.3□□□□□ -0.44
PSMD3-204ENST00000540504 ST8SIA2Q92186 375 aa12.3□□□□□ -0.44
PSMD3-204ENST00000540504 NAA50Q9GZZ1 169 aaKnown RBP12.3□□□□□ -0.44
PSMD3-204ENST00000540504 A0A1W2PS18 150 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms